Protein–RNA interactions for Protein: Q8K2V1

Ppp4r1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r1Q8K2V1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
Ppp4r1Q8K2V1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.55
Ppp4r1Q8K2V1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ppp4r1Q8K2V1 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.68■■□□□ 1.54
Ppp4r1Q8K2V1 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.68■■□□□ 1.54
Ppp4r1Q8K2V1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ppp4r1Q8K2V1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.68■■□□□ 1.54
Ppp4r1Q8K2V1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ppp4r1Q8K2V1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ppp4r1Q8K2V1 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.67■■□□□ 1.54
Ppp4r1Q8K2V1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ppp4r1Q8K2V1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Ppp4r1Q8K2V1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ppp4r1Q8K2V1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ppp4r1Q8K2V1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ppp4r1Q8K2V1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ppp4r1Q8K2V1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ppp4r1Q8K2V1 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.65■■□□□ 1.54
Ppp4r1Q8K2V1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ppp4r1Q8K2V1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ppp4r1Q8K2V1 Gm9397-201ENSMUST00000200125 605 ntBASIC24.64■■□□□ 1.54
Ppp4r1Q8K2V1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Ppp4r1Q8K2V1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ppp4r1Q8K2V1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Ppp4r1Q8K2V1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.62■■□□□ 1.53
Ppp4r1Q8K2V1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ppp4r1Q8K2V1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Ppp4r1Q8K2V1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Ppp4r1Q8K2V1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ppp4r1Q8K2V1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ppp4r1Q8K2V1 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.59■■□□□ 1.53
Ppp4r1Q8K2V1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ppp4r1Q8K2V1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ppp4r1Q8K2V1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ppp4r1Q8K2V1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.58■■□□□ 1.53
Ppp4r1Q8K2V1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ppp4r1Q8K2V1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ppp4r1Q8K2V1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Ppp4r1Q8K2V1 Gm45855-201ENSMUST00000212546 880 ntBASIC24.58■■□□□ 1.53
Ppp4r1Q8K2V1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ppp4r1Q8K2V1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ppp4r1Q8K2V1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
Ppp4r1Q8K2V1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ppp4r1Q8K2V1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ppp4r1Q8K2V1 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.57■■□□□ 1.52
Ppp4r1Q8K2V1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.56■■□□□ 1.52
Ppp4r1Q8K2V1 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.56■■□□□ 1.52
Ppp4r1Q8K2V1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ppp4r1Q8K2V1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Ppp4r1Q8K2V1 Gm24970-201ENSMUST00000175582 82 ntBASIC24.54■■□□□ 1.52
Ppp4r1Q8K2V1 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ppp4r1Q8K2V1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ppp4r1Q8K2V1 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.53■■□□□ 1.52
Ppp4r1Q8K2V1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ppp4r1Q8K2V1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.52■■□□□ 1.52
Ppp4r1Q8K2V1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ppp4r1Q8K2V1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ppp4r1Q8K2V1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ppp4r1Q8K2V1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ppp4r1Q8K2V1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ppp4r1Q8K2V1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Ppp4r1Q8K2V1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.47■■□□□ 1.51
Ppp4r1Q8K2V1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.51
Ppp4r1Q8K2V1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ppp4r1Q8K2V1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ppp4r1Q8K2V1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ppp4r1Q8K2V1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ppp4r1Q8K2V1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ppp4r1Q8K2V1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ppp4r1Q8K2V1 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.42■■□□□ 1.5
Ppp4r1Q8K2V1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.42■■□□□ 1.5
Ppp4r1Q8K2V1 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.41■■□□□ 1.5
Ppp4r1Q8K2V1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.41■■□□□ 1.5
Ppp4r1Q8K2V1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ppp4r1Q8K2V1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ppp4r1Q8K2V1 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ppp4r1Q8K2V1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Ppp4r1Q8K2V1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ppp4r1Q8K2V1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ppp4r1Q8K2V1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ppp4r1Q8K2V1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ppp4r1Q8K2V1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ppp4r1Q8K2V1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
Ppp4r1Q8K2V1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ppp4r1Q8K2V1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.37■■□□□ 1.49
Ppp4r1Q8K2V1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ppp4r1Q8K2V1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.36■■□□□ 1.49
Ppp4r1Q8K2V1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ppp4r1Q8K2V1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Ppp4r1Q8K2V1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ppp4r1Q8K2V1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ppp4r1Q8K2V1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.35■■□□□ 1.49
Ppp4r1Q8K2V1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ppp4r1Q8K2V1 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ppp4r1Q8K2V1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ppp4r1Q8K2V1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Ppp4r1Q8K2V1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ppp4r1Q8K2V1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ppp4r1Q8K2V1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ppp4r1Q8K2V1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms