Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Lin9Q8C735 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Lin9Q8C735 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
Lin9Q8C735 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
Lin9Q8C735 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.5■■□□□ 1.83
Lin9Q8C735 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Lin9Q8C735 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Lin9Q8C735 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
Lin9Q8C735 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Lin9Q8C735 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.47■■□□□ 1.83
Lin9Q8C735 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Lin9Q8C735 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Lin9Q8C735 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
Lin9Q8C735 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.44■■□□□ 1.82
Lin9Q8C735 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.44■■□□□ 1.82
Lin9Q8C735 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lin9Q8C735 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lin9Q8C735 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Lin9Q8C735 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lin9Q8C735 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Lin9Q8C735 Gm6821-201ENSMUST00000107540 542 ntBASIC26.42■■□□□ 1.82
Lin9Q8C735 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lin9Q8C735 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lin9Q8C735 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lin9Q8C735 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Lin9Q8C735 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Lin9Q8C735 Gm8503-201ENSMUST00000118131 455 ntBASIC26.4■■□□□ 1.82
Lin9Q8C735 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
Lin9Q8C735 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Lin9Q8C735 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
Lin9Q8C735 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Lin9Q8C735 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Lin9Q8C735 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.38■■□□□ 1.81
Lin9Q8C735 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Lin9Q8C735 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.37■■□□□ 1.81
Lin9Q8C735 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.36■■□□□ 1.81
Lin9Q8C735 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lin9Q8C735 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lin9Q8C735 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.35■■□□□ 1.81
Lin9Q8C735 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.35■■□□□ 1.81
Lin9Q8C735 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Lin9Q8C735 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Lin9Q8C735 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Lin9Q8C735 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Lin9Q8C735 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lin9Q8C735 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Lin9Q8C735 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lin9Q8C735 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lin9Q8C735 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
Lin9Q8C735 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.32■■□□□ 1.8
Lin9Q8C735 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
Lin9Q8C735 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC26.32■■□□□ 1.8
Lin9Q8C735 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Lin9Q8C735 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lin9Q8C735 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Lin9Q8C735 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Lin9Q8C735 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Lin9Q8C735 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lin9Q8C735 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lin9Q8C735 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Lin9Q8C735 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Lin9Q8C735 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Lin9Q8C735 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Lin9Q8C735 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Lin9Q8C735 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Lin9Q8C735 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Lin9Q8C735 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Lin9Q8C735 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Lin9Q8C735 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Lin9Q8C735 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Lin9Q8C735 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Lin9Q8C735 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Lin9Q8C735 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.22■■□□□ 1.79
Lin9Q8C735 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Lin9Q8C735 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lin9Q8C735 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Lin9Q8C735 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.21■■□□□ 1.79
Lin9Q8C735 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Lin9Q8C735 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Lin9Q8C735 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Lin9Q8C735 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.19■■□□□ 1.78
Lin9Q8C735 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Lin9Q8C735 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Lin9Q8C735 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Lin9Q8C735 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Lin9Q8C735 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.16■■□□□ 1.78
Lin9Q8C735 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Lin9Q8C735 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Lin9Q8C735 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.15■■□□□ 1.78
Lin9Q8C735 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.15■■□□□ 1.78
Lin9Q8C735 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.14■■□□□ 1.78
Lin9Q8C735 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Lin9Q8C735 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Lin9Q8C735 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Lin9Q8C735 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Lin9Q8C735 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.12■■□□□ 1.77
Lin9Q8C735 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Lin9Q8C735 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Lin9Q8C735 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Lin9Q8C735 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms