Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.5■■□□□ 1.19
Col6a6Q8C6K9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Col6a6Q8C6K9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Col6a6Q8C6K9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Col6a6Q8C6K9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Col6a6Q8C6K9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Col6a6Q8C6K9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
Col6a6Q8C6K9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Col6a6Q8C6K9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.47■■□□□ 1.19
Col6a6Q8C6K9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Col6a6Q8C6K9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.46■■□□□ 1.19
Col6a6Q8C6K9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Col6a6Q8C6K9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Col6a6Q8C6K9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Col6a6Q8C6K9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Col6a6Q8C6K9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.41■■□□□ 1.18
Col6a6Q8C6K9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.4■■□□□ 1.18
Col6a6Q8C6K9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Col6a6Q8C6K9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Col6a6Q8C6K9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Col6a6Q8C6K9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Col6a6Q8C6K9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Col6a6Q8C6K9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Col6a6Q8C6K9 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.36■■□□□ 1.17
Col6a6Q8C6K9 Gm6311-201ENSMUST00000073790 878 ntBASIC22.36■■□□□ 1.17
Col6a6Q8C6K9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col6a6Q8C6K9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Col6a6Q8C6K9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.33■■□□□ 1.17
Col6a6Q8C6K9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Col6a6Q8C6K9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.32■■□□□ 1.16
Col6a6Q8C6K9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Col6a6Q8C6K9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Col6a6Q8C6K9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col6a6Q8C6K9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Col6a6Q8C6K9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col6a6Q8C6K9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Col6a6Q8C6K9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.31■■□□□ 1.16
Col6a6Q8C6K9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.29■■□□□ 1.16
Col6a6Q8C6K9 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col6a6Q8C6K9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col6a6Q8C6K9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col6a6Q8C6K9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Col6a6Q8C6K9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.27■■□□□ 1.16
Col6a6Q8C6K9 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.26■■□□□ 1.15
Col6a6Q8C6K9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Col6a6Q8C6K9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.25■■□□□ 1.15
Col6a6Q8C6K9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.24■■□□□ 1.15
Col6a6Q8C6K9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Col6a6Q8C6K9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col6a6Q8C6K9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.23■■□□□ 1.15
Col6a6Q8C6K9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Col6a6Q8C6K9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.23■■□□□ 1.15
Col6a6Q8C6K9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Col6a6Q8C6K9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col6a6Q8C6K9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Col6a6Q8C6K9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col6a6Q8C6K9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Col6a6Q8C6K9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col6a6Q8C6K9 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.21■■□□□ 1.15
Col6a6Q8C6K9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Col6a6Q8C6K9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.21■■□□□ 1.15
Col6a6Q8C6K9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Col6a6Q8C6K9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Col6a6Q8C6K9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Col6a6Q8C6K9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.19■■□□□ 1.14
Col6a6Q8C6K9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Col6a6Q8C6K9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.19■■□□□ 1.14
Col6a6Q8C6K9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Col6a6Q8C6K9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Col6a6Q8C6K9 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col6a6Q8C6K9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col6a6Q8C6K9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.17■■□□□ 1.14
Col6a6Q8C6K9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.17■■□□□ 1.14
Col6a6Q8C6K9 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Col6a6Q8C6K9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Col6a6Q8C6K9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col6a6Q8C6K9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Col6a6Q8C6K9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.16■■□□□ 1.14
Col6a6Q8C6K9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Col6a6Q8C6K9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Col6a6Q8C6K9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Col6a6Q8C6K9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Col6a6Q8C6K9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col6a6Q8C6K9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col6a6Q8C6K9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Col6a6Q8C6K9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Col6a6Q8C6K9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
Col6a6Q8C6K9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Col6a6Q8C6K9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
Col6a6Q8C6K9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Col6a6Q8C6K9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col6a6Q8C6K9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col6a6Q8C6K9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Col6a6Q8C6K9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Col6a6Q8C6K9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.1■■□□□ 1.13
Col6a6Q8C6K9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Col6a6Q8C6K9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col6a6Q8C6K9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Col6a6Q8C6K9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Col6a6Q8C6K9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms