Protein–RNA interactions for Protein: Q8C5U9

Ubqln3, Ubiquilin-3, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3Q8C5U9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubqln3Q8C5U9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubqln3Q8C5U9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubqln3Q8C5U9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubqln3Q8C5U9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ubqln3Q8C5U9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ubqln3Q8C5U9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Ubqln3Q8C5U9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ubqln3Q8C5U9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.09■□□□□ 0.97
Ubqln3Q8C5U9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ubqln3Q8C5U9 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Ubqln3Q8C5U9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ubqln3Q8C5U9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln3Q8C5U9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln3Q8C5U9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln3Q8C5U9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln3Q8C5U9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln3Q8C5U9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ubqln3Q8C5U9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.06■□□□□ 0.96
Ubqln3Q8C5U9 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.06■□□□□ 0.96
Ubqln3Q8C5U9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ubqln3Q8C5U9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubqln3Q8C5U9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ubqln3Q8C5U9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubqln3Q8C5U9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubqln3Q8C5U9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubqln3Q8C5U9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Ubqln3Q8C5U9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ubqln3Q8C5U9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubqln3Q8C5U9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ubqln3Q8C5U9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ubqln3Q8C5U9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ubqln3Q8C5U9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Ubqln3Q8C5U9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ubqln3Q8C5U9 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ubqln3Q8C5U9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ubqln3Q8C5U9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ubqln3Q8C5U9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21■□□□□ 0.95
Ubqln3Q8C5U9 AC157572.2-201ENSMUST00000226970 908 ntBASIC21■□□□□ 0.95
Ubqln3Q8C5U9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ubqln3Q8C5U9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21■□□□□ 0.95
Ubqln3Q8C5U9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln3Q8C5U9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln3Q8C5U9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ubqln3Q8C5U9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln3Q8C5U9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Ubqln3Q8C5U9 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ubqln3Q8C5U9 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Ubqln3Q8C5U9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.98■□□□□ 0.95
Ubqln3Q8C5U9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.97■□□□□ 0.95
Ubqln3Q8C5U9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.97■□□□□ 0.95
Ubqln3Q8C5U9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.97■□□□□ 0.95
Ubqln3Q8C5U9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ubqln3Q8C5U9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ubqln3Q8C5U9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ubqln3Q8C5U9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubqln3Q8C5U9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubqln3Q8C5U9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ubqln3Q8C5U9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ubqln3Q8C5U9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ubqln3Q8C5U9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubqln3Q8C5U9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Ubqln3Q8C5U9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.93■□□□□ 0.94
Ubqln3Q8C5U9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubqln3Q8C5U9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubqln3Q8C5U9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ubqln3Q8C5U9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubqln3Q8C5U9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ubqln3Q8C5U9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ubqln3Q8C5U9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Ubqln3Q8C5U9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ubqln3Q8C5U9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ubqln3Q8C5U9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ubqln3Q8C5U9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ubqln3Q8C5U9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.9■□□□□ 0.94
Ubqln3Q8C5U9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ubqln3Q8C5U9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ubqln3Q8C5U9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.88■□□□□ 0.93
Ubqln3Q8C5U9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.88■□□□□ 0.93
Ubqln3Q8C5U9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ubqln3Q8C5U9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.87■□□□□ 0.93
Ubqln3Q8C5U9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ubqln3Q8C5U9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ubqln3Q8C5U9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ubqln3Q8C5U9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ubqln3Q8C5U9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ubqln3Q8C5U9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ubqln3Q8C5U9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubqln3Q8C5U9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubqln3Q8C5U9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ubqln3Q8C5U9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ubqln3Q8C5U9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.82■□□□□ 0.92
Ubqln3Q8C5U9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.82■□□□□ 0.92
Ubqln3Q8C5U9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.81■□□□□ 0.92
Ubqln3Q8C5U9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubqln3Q8C5U9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ubqln3Q8C5U9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubqln3Q8C5U9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ubqln3Q8C5U9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.8■□□□□ 0.92
Ubqln3Q8C5U9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms