Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Negr1Q80Z24 Gm9397-201ENSMUST00000200125 605 ntBASIC21.44■■□□□ 1.02
Negr1Q80Z24 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Negr1Q80Z24 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Negr1Q80Z24 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.43■■□□□ 1.02
Negr1Q80Z24 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.43■■□□□ 1.02
Negr1Q80Z24 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Negr1Q80Z24 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Negr1Q80Z24 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.42■■□□□ 1.02
Negr1Q80Z24 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Negr1Q80Z24 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Negr1Q80Z24 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Negr1Q80Z24 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Negr1Q80Z24 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.41■■□□□ 1.02
Negr1Q80Z24 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Negr1Q80Z24 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Negr1Q80Z24 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Negr1Q80Z24 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Negr1Q80Z24 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Negr1Q80Z24 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Negr1Q80Z24 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Negr1Q80Z24 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.39■■□□□ 1.01
Negr1Q80Z24 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Negr1Q80Z24 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Negr1Q80Z24 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Negr1Q80Z24 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Negr1Q80Z24 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Negr1Q80Z24 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Negr1Q80Z24 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Negr1Q80Z24 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Negr1Q80Z24 Gm45855-201ENSMUST00000212546 880 ntBASIC21.35■■□□□ 1.01
Negr1Q80Z24 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Negr1Q80Z24 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Negr1Q80Z24 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Negr1Q80Z24 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.34■■□□□ 1.01
Negr1Q80Z24 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.33■■□□□ 1.01
Negr1Q80Z24 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.32■■□□□ 1
Negr1Q80Z24 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.32■■□□□ 1
Negr1Q80Z24 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Negr1Q80Z24 Gm24970-201ENSMUST00000175582 82 ntBASIC21.31■■□□□ 1
Negr1Q80Z24 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Negr1Q80Z24 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Negr1Q80Z24 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Negr1Q80Z24 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Negr1Q80Z24 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Negr1Q80Z24 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Negr1Q80Z24 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Negr1Q80Z24 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Negr1Q80Z24 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.27■■□□□ 1
Negr1Q80Z24 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.27■■□□□ 1
Negr1Q80Z24 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Negr1Q80Z24 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Negr1Q80Z24 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Negr1Q80Z24 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Negr1Q80Z24 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Negr1Q80Z24 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Negr1Q80Z24 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Negr1Q80Z24 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Negr1Q80Z24 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Negr1Q80Z24 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Negr1Q80Z24 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Negr1Q80Z24 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Negr1Q80Z24 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Negr1Q80Z24 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.19■□□□□ 0.98
Negr1Q80Z24 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.19■□□□□ 0.98
Negr1Q80Z24 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Negr1Q80Z24 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Negr1Q80Z24 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Negr1Q80Z24 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Negr1Q80Z24 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Negr1Q80Z24 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.18■□□□□ 0.98
Negr1Q80Z24 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Negr1Q80Z24 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Negr1Q80Z24 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Negr1Q80Z24 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Negr1Q80Z24 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Negr1Q80Z24 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.15■□□□□ 0.98
Negr1Q80Z24 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Negr1Q80Z24 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Negr1Q80Z24 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Negr1Q80Z24 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Negr1Q80Z24 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Negr1Q80Z24 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.12■□□□□ 0.97
Negr1Q80Z24 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Negr1Q80Z24 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Negr1Q80Z24 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Negr1Q80Z24 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Negr1Q80Z24 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Negr1Q80Z24 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Negr1Q80Z24 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Negr1Q80Z24 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.1■□□□□ 0.97
Negr1Q80Z24 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Negr1Q80Z24 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Negr1Q80Z24 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Negr1Q80Z24 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Negr1Q80Z24 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Negr1Q80Z24 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Negr1Q80Z24 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Negr1Q80Z24 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Negr1Q80Z24 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms