Protein–RNA interactions for Protein: Q80WR1

Tspan18, Tetraspanin-18, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18Q80WR1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Tspan18Q80WR1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Tspan18Q80WR1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Tspan18Q80WR1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Tspan18Q80WR1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Tspan18Q80WR1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.38■■□□□ 1.81
Tspan18Q80WR1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Tspan18Q80WR1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
Tspan18Q80WR1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tspan18Q80WR1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
Tspan18Q80WR1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Tspan18Q80WR1 Gm8503-201ENSMUST00000118131 455 ntBASIC26.36■■□□□ 1.81
Tspan18Q80WR1 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.36■■□□□ 1.81
Tspan18Q80WR1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Tspan18Q80WR1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Tspan18Q80WR1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Tspan18Q80WR1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Tspan18Q80WR1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Tspan18Q80WR1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Tspan18Q80WR1 Nkain2-201ENSMUST00000092602 558 ntBASIC26.31■■□□□ 1.8
Tspan18Q80WR1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Tspan18Q80WR1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Tspan18Q80WR1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Tspan18Q80WR1 Gm6821-201ENSMUST00000107540 542 ntBASIC26.28■■□□□ 1.8
Tspan18Q80WR1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.27■■□□□ 1.8
Tspan18Q80WR1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Tspan18Q80WR1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tspan18Q80WR1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Tspan18Q80WR1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Tspan18Q80WR1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tspan18Q80WR1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Tspan18Q80WR1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Tspan18Q80WR1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.23■■□□□ 1.79
Tspan18Q80WR1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.23■■□□□ 1.79
Tspan18Q80WR1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Tspan18Q80WR1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Tspan18Q80WR1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Tspan18Q80WR1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.22■■□□□ 1.79
Tspan18Q80WR1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tspan18Q80WR1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.22■■□□□ 1.79
Tspan18Q80WR1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tspan18Q80WR1 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.21■■□□□ 1.79
Tspan18Q80WR1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Tspan18Q80WR1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.21■■□□□ 1.79
Tspan18Q80WR1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Tspan18Q80WR1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Tspan18Q80WR1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Tspan18Q80WR1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Tspan18Q80WR1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Tspan18Q80WR1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.17■■□□□ 1.78
Tspan18Q80WR1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.17■■□□□ 1.78
Tspan18Q80WR1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Tspan18Q80WR1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Tspan18Q80WR1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tspan18Q80WR1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Tspan18Q80WR1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Tspan18Q80WR1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Tspan18Q80WR1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.14■■□□□ 1.78
Tspan18Q80WR1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Tspan18Q80WR1 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.14■■□□□ 1.77
Tspan18Q80WR1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Tspan18Q80WR1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Tspan18Q80WR1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Tspan18Q80WR1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.12■■□□□ 1.77
Tspan18Q80WR1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
Tspan18Q80WR1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Tspan18Q80WR1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.1■■□□□ 1.77
Tspan18Q80WR1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.1■■□□□ 1.77
Tspan18Q80WR1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Tspan18Q80WR1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Tspan18Q80WR1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tspan18Q80WR1 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.09■■□□□ 1.77
Tspan18Q80WR1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tspan18Q80WR1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Tspan18Q80WR1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.09■■□□□ 1.77
Tspan18Q80WR1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Tspan18Q80WR1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Tspan18Q80WR1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Tspan18Q80WR1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Tspan18Q80WR1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Tspan18Q80WR1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.03■■□□□ 1.76
Tspan18Q80WR1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Tspan18Q80WR1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tspan18Q80WR1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Tspan18Q80WR1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Tspan18Q80WR1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Tspan18Q80WR1 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.02■■□□□ 1.76
Tspan18Q80WR1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26■■□□□ 1.75
Tspan18Q80WR1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Tspan18Q80WR1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Tspan18Q80WR1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.99■■□□□ 1.75
Tspan18Q80WR1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Tspan18Q80WR1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Tspan18Q80WR1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Tspan18Q80WR1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Tspan18Q80WR1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.97■■□□□ 1.75
Tspan18Q80WR1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.97■■□□□ 1.75
Tspan18Q80WR1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Tspan18Q80WR1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Tspan18Q80WR1 Gm30023-201ENSMUST00000197970 889 ntBASIC25.96■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms