Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Prpf40bQ80W14 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Prpf40bQ80W14 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Prpf40bQ80W14 Cap2-205ENSMUST00000225824 1634 ntBASIC28.12■■■□□ 2.09
Prpf40bQ80W14 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Prpf40bQ80W14 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.12■■■□□ 2.09
Prpf40bQ80W14 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Prpf40bQ80W14 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.1■■■□□ 2.09
Prpf40bQ80W14 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Prpf40bQ80W14 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Prpf40bQ80W14 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Prpf40bQ80W14 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC28.09■■■□□ 2.09
Prpf40bQ80W14 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Prpf40bQ80W14 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.08■■■□□ 2.09
Prpf40bQ80W14 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Prpf40bQ80W14 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
Prpf40bQ80W14 Zxda-201ENSMUST00000117281 2621 ntBASIC28.05■■■□□ 2.08
Prpf40bQ80W14 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.04■■■□□ 2.08
Prpf40bQ80W14 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
Prpf40bQ80W14 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Prpf40bQ80W14 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.02■■■□□ 2.08
Prpf40bQ80W14 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.01■■■□□ 2.07
Prpf40bQ80W14 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
Prpf40bQ80W14 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Prpf40bQ80W14 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.99■■■□□ 2.07
Prpf40bQ80W14 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Prpf40bQ80W14 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
Prpf40bQ80W14 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.97■■■□□ 2.07
Prpf40bQ80W14 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Prpf40bQ80W14 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
Prpf40bQ80W14 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Prpf40bQ80W14 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Prpf40bQ80W14 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Prpf40bQ80W14 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Prpf40bQ80W14 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.92■■■□□ 2.06
Prpf40bQ80W14 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.92■■■□□ 2.06
Prpf40bQ80W14 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
Prpf40bQ80W14 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Prpf40bQ80W14 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Prpf40bQ80W14 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Prpf40bQ80W14 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
Prpf40bQ80W14 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Prpf40bQ80W14 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.9■■■□□ 2.06
Prpf40bQ80W14 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Prpf40bQ80W14 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Prpf40bQ80W14 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.88■■■□□ 2.05
Prpf40bQ80W14 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Prpf40bQ80W14 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
Prpf40bQ80W14 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Prpf40bQ80W14 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Prpf40bQ80W14 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Prpf40bQ80W14 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
Prpf40bQ80W14 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.86■■■□□ 2.05
Prpf40bQ80W14 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Prpf40bQ80W14 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Prpf40bQ80W14 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Prpf40bQ80W14 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.85■■■□□ 2.05
Prpf40bQ80W14 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.85■■■□□ 2.05
Prpf40bQ80W14 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Prpf40bQ80W14 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
Prpf40bQ80W14 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
Prpf40bQ80W14 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Prpf40bQ80W14 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Prpf40bQ80W14 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Prpf40bQ80W14 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Prpf40bQ80W14 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Prpf40bQ80W14 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Prpf40bQ80W14 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Prpf40bQ80W14 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Prpf40bQ80W14 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Prpf40bQ80W14 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Prpf40bQ80W14 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Prpf40bQ80W14 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Prpf40bQ80W14 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Prpf40bQ80W14 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.73■■■□□ 2.03
Prpf40bQ80W14 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.73■■■□□ 2.03
Prpf40bQ80W14 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Prpf40bQ80W14 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Prpf40bQ80W14 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Prpf40bQ80W14 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Prpf40bQ80W14 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Prpf40bQ80W14 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.7■■■□□ 2.02
Prpf40bQ80W14 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Prpf40bQ80W14 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Prpf40bQ80W14 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.69■■■□□ 2.02
Prpf40bQ80W14 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC27.69■■■□□ 2.02
Prpf40bQ80W14 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Prpf40bQ80W14 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Prpf40bQ80W14 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
Prpf40bQ80W14 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.67■■■□□ 2.02
Prpf40bQ80W14 Gm6311-201ENSMUST00000073790 878 ntBASIC27.66■■■□□ 2.02
Prpf40bQ80W14 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.66■■■□□ 2.02
Prpf40bQ80W14 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Prpf40bQ80W14 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.65■■■□□ 2.02
Prpf40bQ80W14 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
Prpf40bQ80W14 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
Prpf40bQ80W14 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Prpf40bQ80W14 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Prpf40bQ80W14 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.62■■■□□ 2.01
Prpf40bQ80W14 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms