Protein–RNA interactions for Protein: Q80SS5

Ifna12, Interferon alpha-12, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna12Q80SS5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ifna12Q80SS5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ifna12Q80SS5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ifna12Q80SS5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ifna12Q80SS5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ifna12Q80SS5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ifna12Q80SS5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ifna12Q80SS5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
Ifna12Q80SS5 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ifna12Q80SS5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ifna12Q80SS5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ifna12Q80SS5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ifna12Q80SS5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ifna12Q80SS5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ifna12Q80SS5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ifna12Q80SS5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ifna12Q80SS5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ifna12Q80SS5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ifna12Q80SS5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ifna12Q80SS5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ifna12Q80SS5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.57■□□□□ 0.72
Ifna12Q80SS5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.56■□□□□ 0.72
Ifna12Q80SS5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ifna12Q80SS5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ifna12Q80SS5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ifna12Q80SS5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.54■□□□□ 0.72
Ifna12Q80SS5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ifna12Q80SS5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ifna12Q80SS5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ifna12Q80SS5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ifna12Q80SS5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ifna12Q80SS5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ifna12Q80SS5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ifna12Q80SS5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ifna12Q80SS5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.5■□□□□ 0.71
Ifna12Q80SS5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ifna12Q80SS5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Ifna12Q80SS5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ifna12Q80SS5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ifna12Q80SS5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ifna12Q80SS5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.49■□□□□ 0.71
Ifna12Q80SS5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ifna12Q80SS5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ifna12Q80SS5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.47■□□□□ 0.71
Ifna12Q80SS5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ifna12Q80SS5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ifna12Q80SS5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ifna12Q80SS5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.46■□□□□ 0.71
Ifna12Q80SS5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ifna12Q80SS5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ifna12Q80SS5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ifna12Q80SS5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ifna12Q80SS5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ifna12Q80SS5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ifna12Q80SS5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ifna12Q80SS5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ifna12Q80SS5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ifna12Q80SS5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ifna12Q80SS5 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.42■□□□□ 0.7
Ifna12Q80SS5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifna12Q80SS5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ifna12Q80SS5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ifna12Q80SS5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna12Q80SS5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna12Q80SS5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna12Q80SS5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna12Q80SS5 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ifna12Q80SS5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ifna12Q80SS5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifna12Q80SS5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ifna12Q80SS5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifna12Q80SS5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Ifna12Q80SS5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ifna12Q80SS5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ifna12Q80SS5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ifna12Q80SS5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifna12Q80SS5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ifna12Q80SS5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ifna12Q80SS5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Ifna12Q80SS5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ifna12Q80SS5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.35■□□□□ 0.69
Ifna12Q80SS5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Ifna12Q80SS5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ifna12Q80SS5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifna12Q80SS5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ifna12Q80SS5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.34■□□□□ 0.69
Ifna12Q80SS5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ifna12Q80SS5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ifna12Q80SS5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ifna12Q80SS5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.33■□□□□ 0.68
Ifna12Q80SS5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ifna12Q80SS5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifna12Q80SS5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifna12Q80SS5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ifna12Q80SS5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ifna12Q80SS5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Ifna12Q80SS5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ifna12Q80SS5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ifna12Q80SS5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ifna12Q80SS5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms