Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.59■■□□□ 1.85
Sh3d21Q7TSG5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sh3d21Q7TSG5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sh3d21Q7TSG5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sh3d21Q7TSG5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sh3d21Q7TSG5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Sh3d21Q7TSG5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.56■■□□□ 1.84
Sh3d21Q7TSG5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
Sh3d21Q7TSG5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Sh3d21Q7TSG5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Sh3d21Q7TSG5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
Sh3d21Q7TSG5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sh3d21Q7TSG5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sh3d21Q7TSG5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sh3d21Q7TSG5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sh3d21Q7TSG5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sh3d21Q7TSG5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sh3d21Q7TSG5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sh3d21Q7TSG5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Sh3d21Q7TSG5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3d21Q7TSG5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3d21Q7TSG5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3d21Q7TSG5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3d21Q7TSG5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sh3d21Q7TSG5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Sh3d21Q7TSG5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sh3d21Q7TSG5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
Sh3d21Q7TSG5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.49■■□□□ 1.83
Sh3d21Q7TSG5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Sh3d21Q7TSG5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sh3d21Q7TSG5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sh3d21Q7TSG5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Sh3d21Q7TSG5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sh3d21Q7TSG5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sh3d21Q7TSG5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sh3d21Q7TSG5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Sh3d21Q7TSG5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.44■■□□□ 1.82
Sh3d21Q7TSG5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.44■■□□□ 1.82
Sh3d21Q7TSG5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Sh3d21Q7TSG5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sh3d21Q7TSG5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sh3d21Q7TSG5 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sh3d21Q7TSG5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sh3d21Q7TSG5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.4■■□□□ 1.82
Sh3d21Q7TSG5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Sh3d21Q7TSG5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Sh3d21Q7TSG5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.38■■□□□ 1.81
Sh3d21Q7TSG5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Sh3d21Q7TSG5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sh3d21Q7TSG5 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Sh3d21Q7TSG5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sh3d21Q7TSG5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Sh3d21Q7TSG5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sh3d21Q7TSG5 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sh3d21Q7TSG5 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.32■■□□□ 1.8
Sh3d21Q7TSG5 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Sh3d21Q7TSG5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sh3d21Q7TSG5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.31■■□□□ 1.8
Sh3d21Q7TSG5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.31■■□□□ 1.8
Sh3d21Q7TSG5 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Sh3d21Q7TSG5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sh3d21Q7TSG5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Sh3d21Q7TSG5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Sh3d21Q7TSG5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Sh3d21Q7TSG5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Sh3d21Q7TSG5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sh3d21Q7TSG5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Sh3d21Q7TSG5 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.25■■□□□ 1.79
Sh3d21Q7TSG5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sh3d21Q7TSG5 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Sh3d21Q7TSG5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sh3d21Q7TSG5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.24■■□□□ 1.79
Sh3d21Q7TSG5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sh3d21Q7TSG5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sh3d21Q7TSG5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
Sh3d21Q7TSG5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Sh3d21Q7TSG5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.19■■□□□ 1.78
Sh3d21Q7TSG5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sh3d21Q7TSG5 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Sh3d21Q7TSG5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Sh3d21Q7TSG5 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sh3d21Q7TSG5 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.19■■□□□ 1.78
Sh3d21Q7TSG5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sh3d21Q7TSG5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Sh3d21Q7TSG5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Sh3d21Q7TSG5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.17■■□□□ 1.78
Sh3d21Q7TSG5 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC26.17■■□□□ 1.78
Sh3d21Q7TSG5 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.16■■□□□ 1.78
Sh3d21Q7TSG5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sh3d21Q7TSG5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Sh3d21Q7TSG5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Sh3d21Q7TSG5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC26.15■■□□□ 1.78
Sh3d21Q7TSG5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Sh3d21Q7TSG5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
Sh3d21Q7TSG5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Sh3d21Q7TSG5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sh3d21Q7TSG5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sh3d21Q7TSG5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Sh3d21Q7TSG5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sh3d21Q7TSG5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms