Protein–RNA interactions for Protein: Q63829

Commd3, COMM domain-containing protein 3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Commd3Q63829 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Commd3Q63829 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Commd3Q63829 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Commd3Q63829 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Commd3Q63829 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.07■□□□□ 0.8
Commd3Q63829 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Commd3Q63829 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.06■□□□□ 0.8
Commd3Q63829 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Commd3Q63829 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Commd3Q63829 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Commd3Q63829 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Commd3Q63829 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.04■□□□□ 0.8
Commd3Q63829 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Commd3Q63829 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Commd3Q63829 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Commd3Q63829 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.03■□□□□ 0.8
Commd3Q63829 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Commd3Q63829 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Commd3Q63829 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Commd3Q63829 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Commd3Q63829 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Commd3Q63829 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Commd3Q63829 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Commd3Q63829 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.99■□□□□ 0.79
Commd3Q63829 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Commd3Q63829 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Commd3Q63829 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.97■□□□□ 0.79
Commd3Q63829 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Commd3Q63829 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Commd3Q63829 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Commd3Q63829 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Commd3Q63829 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Commd3Q63829 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Commd3Q63829 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Commd3Q63829 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Commd3Q63829 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Commd3Q63829 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Commd3Q63829 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.93■□□□□ 0.78
Commd3Q63829 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Commd3Q63829 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Commd3Q63829 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Commd3Q63829 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Commd3Q63829 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Commd3Q63829 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Commd3Q63829 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Commd3Q63829 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Commd3Q63829 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Commd3Q63829 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
Commd3Q63829 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Commd3Q63829 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Commd3Q63829 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Commd3Q63829 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Commd3Q63829 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Commd3Q63829 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Commd3Q63829 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Commd3Q63829 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Commd3Q63829 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Commd3Q63829 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Commd3Q63829 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Commd3Q63829 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Commd3Q63829 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Commd3Q63829 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Commd3Q63829 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Commd3Q63829 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Commd3Q63829 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Commd3Q63829 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Commd3Q63829 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Commd3Q63829 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Commd3Q63829 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Commd3Q63829 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Commd3Q63829 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Commd3Q63829 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Commd3Q63829 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Commd3Q63829 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Commd3Q63829 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Commd3Q63829 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Commd3Q63829 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Commd3Q63829 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Commd3Q63829 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Commd3Q63829 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Commd3Q63829 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Commd3Q63829 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Commd3Q63829 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Commd3Q63829 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Commd3Q63829 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Commd3Q63829 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Commd3Q63829 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Commd3Q63829 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.75■□□□□ 0.75
Commd3Q63829 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Commd3Q63829 Gm25262-201ENSMUST00000174934 133 ntBASIC19.75■□□□□ 0.75
Commd3Q63829 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Commd3Q63829 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Commd3Q63829 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Commd3Q63829 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Commd3Q63829 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Commd3Q63829 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Commd3Q63829 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.74■□□□□ 0.75
Commd3Q63829 Gm27322-201ENSMUST00000184007 104 ntBASIC19.74■□□□□ 0.75
Commd3Q63829 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Commd3Q63829 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms