Protein–RNA interactions for Protein: Q62472

Lcn4, Vomeronasal secretory protein 2, mousemouse

Predictions only

Length 185 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn4Q62472 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lcn4Q62472 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lcn4Q62472 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lcn4Q62472 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lcn4Q62472 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lcn4Q62472 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.25■□□□□ 0.99
Lcn4Q62472 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lcn4Q62472 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lcn4Q62472 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lcn4Q62472 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.24■□□□□ 0.99
Lcn4Q62472 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lcn4Q62472 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lcn4Q62472 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lcn4Q62472 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lcn4Q62472 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Lcn4Q62472 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lcn4Q62472 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lcn4Q62472 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lcn4Q62472 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Lcn4Q62472 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lcn4Q62472 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lcn4Q62472 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Lcn4Q62472 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.2■□□□□ 0.98
Lcn4Q62472 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lcn4Q62472 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lcn4Q62472 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Lcn4Q62472 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lcn4Q62472 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lcn4Q62472 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lcn4Q62472 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lcn4Q62472 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Lcn4Q62472 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lcn4Q62472 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lcn4Q62472 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lcn4Q62472 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lcn4Q62472 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Lcn4Q62472 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.15■□□□□ 0.98
Lcn4Q62472 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lcn4Q62472 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lcn4Q62472 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lcn4Q62472 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.12■□□□□ 0.97
Lcn4Q62472 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lcn4Q62472 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lcn4Q62472 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lcn4Q62472 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lcn4Q62472 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Lcn4Q62472 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.08■□□□□ 0.97
Lcn4Q62472 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Lcn4Q62472 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.06■□□□□ 0.96
Lcn4Q62472 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lcn4Q62472 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lcn4Q62472 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lcn4Q62472 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn4Q62472 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn4Q62472 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn4Q62472 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Lcn4Q62472 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Lcn4Q62472 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lcn4Q62472 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lcn4Q62472 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Lcn4Q62472 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Lcn4Q62472 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lcn4Q62472 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lcn4Q62472 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Lcn4Q62472 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn4Q62472 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Lcn4Q62472 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.99■□□□□ 0.95
Lcn4Q62472 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn4Q62472 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Lcn4Q62472 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lcn4Q62472 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lcn4Q62472 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lcn4Q62472 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Lcn4Q62472 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Lcn4Q62472 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lcn4Q62472 Zfp131-205ENSMUST00000223812 663 ntBASIC20.96■□□□□ 0.95
Lcn4Q62472 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lcn4Q62472 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lcn4Q62472 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Lcn4Q62472 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lcn4Q62472 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lcn4Q62472 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lcn4Q62472 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lcn4Q62472 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lcn4Q62472 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.94■□□□□ 0.94
Lcn4Q62472 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lcn4Q62472 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Lcn4Q62472 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lcn4Q62472 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Lcn4Q62472 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lcn4Q62472 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.91■□□□□ 0.94
Lcn4Q62472 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn4Q62472 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.91■□□□□ 0.94
Lcn4Q62472 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn4Q62472 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Lcn4Q62472 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lcn4Q62472 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Lcn4Q62472 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lcn4Q62472 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.89■□□□□ 0.93
Lcn4Q62472 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms