Protein–RNA interactions for Protein: Q3UF64

Rnft2, RING finger and transmembrane domain-containing protein 2, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft2Q3UF64 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnft2Q3UF64 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rnft2Q3UF64 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Rnft2Q3UF64 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.91■□□□□ 0.94
Rnft2Q3UF64 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rnft2Q3UF64 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnft2Q3UF64 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnft2Q3UF64 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rnft2Q3UF64 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rnft2Q3UF64 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnft2Q3UF64 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnft2Q3UF64 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.88■□□□□ 0.93
Rnft2Q3UF64 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnft2Q3UF64 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnft2Q3UF64 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.87■□□□□ 0.93
Rnft2Q3UF64 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnft2Q3UF64 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnft2Q3UF64 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnft2Q3UF64 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rnft2Q3UF64 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnft2Q3UF64 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnft2Q3UF64 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Rnft2Q3UF64 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnft2Q3UF64 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnft2Q3UF64 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.85■□□□□ 0.93
Rnft2Q3UF64 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnft2Q3UF64 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnft2Q3UF64 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnft2Q3UF64 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnft2Q3UF64 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnft2Q3UF64 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnft2Q3UF64 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnft2Q3UF64 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnft2Q3UF64 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnft2Q3UF64 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnft2Q3UF64 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnft2Q3UF64 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnft2Q3UF64 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnft2Q3UF64 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Rnft2Q3UF64 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnft2Q3UF64 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.79■□□□□ 0.92
Rnft2Q3UF64 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.79■□□□□ 0.92
Rnft2Q3UF64 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnft2Q3UF64 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnft2Q3UF64 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnft2Q3UF64 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Rnft2Q3UF64 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnft2Q3UF64 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnft2Q3UF64 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnft2Q3UF64 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rnft2Q3UF64 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rnft2Q3UF64 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnft2Q3UF64 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnft2Q3UF64 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnft2Q3UF64 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnft2Q3UF64 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnft2Q3UF64 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnft2Q3UF64 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnft2Q3UF64 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnft2Q3UF64 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnft2Q3UF64 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnft2Q3UF64 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnft2Q3UF64 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnft2Q3UF64 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnft2Q3UF64 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnft2Q3UF64 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnft2Q3UF64 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rnft2Q3UF64 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnft2Q3UF64 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnft2Q3UF64 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnft2Q3UF64 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnft2Q3UF64 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnft2Q3UF64 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Rnft2Q3UF64 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.68■□□□□ 0.9
Rnft2Q3UF64 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnft2Q3UF64 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnft2Q3UF64 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnft2Q3UF64 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Rnft2Q3UF64 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnft2Q3UF64 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnft2Q3UF64 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnft2Q3UF64 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnft2Q3UF64 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnft2Q3UF64 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnft2Q3UF64 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnft2Q3UF64 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnft2Q3UF64 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnft2Q3UF64 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rnft2Q3UF64 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
Rnft2Q3UF64 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnft2Q3UF64 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rnft2Q3UF64 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rnft2Q3UF64 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnft2Q3UF64 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnft2Q3UF64 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rnft2Q3UF64 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnft2Q3UF64 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnft2Q3UF64 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.6■□□□□ 0.89
Rnft2Q3UF64 Gm45855-201ENSMUST00000212546 880 ntBASIC20.6■□□□□ 0.89
Rnft2Q3UF64 Gm9397-201ENSMUST00000200125 605 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms