Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.95■■□□□ 1.27
Cacna1aP97445 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Cacna1aP97445 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Cacna1aP97445 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cacna1aP97445 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.91■■□□□ 1.26
Cacna1aP97445 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Cacna1aP97445 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Cacna1aP97445 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Cacna1aP97445 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Cacna1aP97445 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cacna1aP97445 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cacna1aP97445 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cacna1aP97445 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.86■■□□□ 1.25
Cacna1aP97445 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.86■■□□□ 1.25
Cacna1aP97445 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.84■■□□□ 1.25
Cacna1aP97445 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Cacna1aP97445 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.82■■□□□ 1.24
Cacna1aP97445 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Cacna1aP97445 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Cacna1aP97445 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cacna1aP97445 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Cacna1aP97445 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Cacna1aP97445 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.8■■□□□ 1.24
Cacna1aP97445 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.79■■□□□ 1.24
Cacna1aP97445 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cacna1aP97445 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Cacna1aP97445 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.76■■□□□ 1.23
Cacna1aP97445 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cacna1aP97445 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cacna1aP97445 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cacna1aP97445 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cacna1aP97445 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cacna1aP97445 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.71■■□□□ 1.23
Cacna1aP97445 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.71■■□□□ 1.23
Cacna1aP97445 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cacna1aP97445 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Cacna1aP97445 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.67■■□□□ 1.22
Cacna1aP97445 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.67■■□□□ 1.22
Cacna1aP97445 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cacna1aP97445 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cacna1aP97445 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cacna1aP97445 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.64■■□□□ 1.21
Cacna1aP97445 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cacna1aP97445 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cacna1aP97445 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cacna1aP97445 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cacna1aP97445 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.62■■□□□ 1.21
Cacna1aP97445 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Cacna1aP97445 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.62■■□□□ 1.21
Cacna1aP97445 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cacna1aP97445 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.62■■□□□ 1.21
Cacna1aP97445 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cacna1aP97445 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cacna1aP97445 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cacna1aP97445 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cacna1aP97445 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cacna1aP97445 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.61■■□□□ 1.21
Cacna1aP97445 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cacna1aP97445 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cacna1aP97445 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.6■■□□□ 1.21
Cacna1aP97445 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacna1aP97445 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacna1aP97445 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacna1aP97445 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.6■■□□□ 1.21
Cacna1aP97445 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cacna1aP97445 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cacna1aP97445 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cacna1aP97445 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.58■■□□□ 1.21
Cacna1aP97445 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.58■■□□□ 1.21
Cacna1aP97445 Gm22567-201ENSMUST00000175542 342 ntBASIC22.58■■□□□ 1.21
Cacna1aP97445 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Cacna1aP97445 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Cacna1aP97445 Gm6311-201ENSMUST00000073790 878 ntBASIC22.58■■□□□ 1.21
Cacna1aP97445 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cacna1aP97445 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Cacna1aP97445 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cacna1aP97445 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.54■■□□□ 1.2
Cacna1aP97445 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cacna1aP97445 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.53■■□□□ 1.2
Cacna1aP97445 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cacna1aP97445 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Cacna1aP97445 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Cacna1aP97445 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cacna1aP97445 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Cacna1aP97445 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Cacna1aP97445 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cacna1aP97445 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Cacna1aP97445 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacna1aP97445 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cacna1aP97445 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Cacna1aP97445 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Cacna1aP97445 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Cacna1aP97445 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cacna1aP97445 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cacna1aP97445 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.49■■□□□ 1.19
Cacna1aP97445 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.49■■□□□ 1.19
Cacna1aP97445 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Cacna1aP97445 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cacna1aP97445 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.48■■□□□ 1.19
Cacna1aP97445 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms