Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SgcbP82349 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SgcbP82349 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SgcbP82349 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SgcbP82349 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SgcbP82349 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.64■■□□□ 1.05
SgcbP82349 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SgcbP82349 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.63■■□□□ 1.05
SgcbP82349 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SgcbP82349 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SgcbP82349 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SgcbP82349 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SgcbP82349 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SgcbP82349 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SgcbP82349 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SgcbP82349 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SgcbP82349 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SgcbP82349 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.6■■□□□ 1.05
SgcbP82349 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SgcbP82349 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SgcbP82349 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SgcbP82349 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.57■■□□□ 1.04
SgcbP82349 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SgcbP82349 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SgcbP82349 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
SgcbP82349 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SgcbP82349 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SgcbP82349 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.55■■□□□ 1.04
SgcbP82349 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SgcbP82349 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SgcbP82349 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.55■■□□□ 1.04
SgcbP82349 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SgcbP82349 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SgcbP82349 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SgcbP82349 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.54■■□□□ 1.04
SgcbP82349 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SgcbP82349 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SgcbP82349 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SgcbP82349 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SgcbP82349 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SgcbP82349 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SgcbP82349 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SgcbP82349 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SgcbP82349 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SgcbP82349 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SgcbP82349 Gm6821-201ENSMUST00000107540 542 ntBASIC21.51■■□□□ 1.03
SgcbP82349 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
SgcbP82349 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.5■■□□□ 1.03
SgcbP82349 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SgcbP82349 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SgcbP82349 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.49■■□□□ 1.03
SgcbP82349 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SgcbP82349 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SgcbP82349 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SgcbP82349 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SgcbP82349 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.47■■□□□ 1.03
SgcbP82349 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SgcbP82349 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SgcbP82349 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SgcbP82349 Nkain2-201ENSMUST00000092602 558 ntBASIC21.46■■□□□ 1.03
SgcbP82349 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SgcbP82349 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SgcbP82349 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SgcbP82349 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SgcbP82349 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SgcbP82349 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SgcbP82349 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.45■■□□□ 1.02
SgcbP82349 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SgcbP82349 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SgcbP82349 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
SgcbP82349 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SgcbP82349 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SgcbP82349 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
SgcbP82349 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SgcbP82349 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SgcbP82349 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SgcbP82349 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.41■■□□□ 1.02
SgcbP82349 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SgcbP82349 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SgcbP82349 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SgcbP82349 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.4■■□□□ 1.02
SgcbP82349 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SgcbP82349 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.4■■□□□ 1.02
SgcbP82349 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SgcbP82349 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SgcbP82349 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SgcbP82349 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SgcbP82349 Gm8503-201ENSMUST00000118131 455 ntBASIC21.39■■□□□ 1.01
SgcbP82349 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SgcbP82349 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SgcbP82349 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SgcbP82349 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SgcbP82349 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
SgcbP82349 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SgcbP82349 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.37■■□□□ 1.01
SgcbP82349 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SgcbP82349 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.37■■□□□ 1.01
SgcbP82349 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SgcbP82349 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SgcbP82349 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms