Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne2P59108 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne2P59108 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cpne2P59108 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne2P59108 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Cpne2P59108 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.1■□□□□ 0.81
Cpne2P59108 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne2P59108 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.1■□□□□ 0.81
Cpne2P59108 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cpne2P59108 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne2P59108 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne2P59108 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cpne2P59108 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Cpne2P59108 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cpne2P59108 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cpne2P59108 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne2P59108 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.07■□□□□ 0.8
Cpne2P59108 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cpne2P59108 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cpne2P59108 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne2P59108 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.06■□□□□ 0.8
Cpne2P59108 Gm24804-201ENSMUST00000174982 85 ntBASIC20.06■□□□□ 0.8
Cpne2P59108 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cpne2P59108 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne2P59108 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cpne2P59108 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne2P59108 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.04■□□□□ 0.8
Cpne2P59108 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cpne2P59108 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne2P59108 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne2P59108 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cpne2P59108 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne2P59108 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne2P59108 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne2P59108 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne2P59108 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cpne2P59108 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne2P59108 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.01■□□□□ 0.79
Cpne2P59108 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cpne2P59108 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne2P59108 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne2P59108 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne2P59108 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cpne2P59108 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cpne2P59108 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cpne2P59108 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cpne2P59108 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne2P59108 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cpne2P59108 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cpne2P59108 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpne2P59108 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpne2P59108 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpne2P59108 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cpne2P59108 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cpne2P59108 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpne2P59108 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cpne2P59108 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
Cpne2P59108 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cpne2P59108 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cpne2P59108 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne2P59108 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.94■□□□□ 0.78
Cpne2P59108 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.94■□□□□ 0.78
Cpne2P59108 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne2P59108 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpne2P59108 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cpne2P59108 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cpne2P59108 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpne2P59108 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cpne2P59108 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne2P59108 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne2P59108 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Cpne2P59108 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne2P59108 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne2P59108 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpne2P59108 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpne2P59108 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cpne2P59108 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cpne2P59108 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Cpne2P59108 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.88■□□□□ 0.77
Cpne2P59108 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne2P59108 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cpne2P59108 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne2P59108 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne2P59108 Gm16148-201ENSMUST00000119653 893 ntBASIC19.87■□□□□ 0.77
Cpne2P59108 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cpne2P59108 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne2P59108 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne2P59108 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cpne2P59108 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.86■□□□□ 0.77
Cpne2P59108 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne2P59108 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cpne2P59108 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.85■□□□□ 0.77
Cpne2P59108 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne2P59108 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne2P59108 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cpne2P59108 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne2P59108 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne2P59108 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cpne2P59108 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cpne2P59108 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms