Protein–RNA interactions for Protein: P57748

Mmp20, Matrix metalloproteinase-20, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp20P57748 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.69■■■□□ 2.18
Mmp20P57748 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Mmp20P57748 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Mmp20P57748 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Mmp20P57748 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Mmp20P57748 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Mmp20P57748 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.65■■■□□ 2.18
Mmp20P57748 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.64■■■□□ 2.18
Mmp20P57748 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.62■■■□□ 2.17
Mmp20P57748 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.62■■■□□ 2.17
Mmp20P57748 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Mmp20P57748 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Mmp20P57748 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Mmp20P57748 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Mmp20P57748 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Mmp20P57748 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Mmp20P57748 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Mmp20P57748 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Mmp20P57748 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Mmp20P57748 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Mmp20P57748 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.55■■■□□ 2.16
Mmp20P57748 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Mmp20P57748 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Mmp20P57748 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Mmp20P57748 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Mmp20P57748 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Mmp20P57748 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Mmp20P57748 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.52■■■□□ 2.16
Mmp20P57748 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.52■■■□□ 2.16
Mmp20P57748 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Mmp20P57748 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Mmp20P57748 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Mmp20P57748 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.49■■■□□ 2.15
Mmp20P57748 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.49■■■□□ 2.15
Mmp20P57748 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Mmp20P57748 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Mmp20P57748 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.48■■■□□ 2.15
Mmp20P57748 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Mmp20P57748 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Mmp20P57748 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Mmp20P57748 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.46■■■□□ 2.15
Mmp20P57748 Gm11175-201ENSMUST00000116172 543 ntBASIC28.46■■■□□ 2.15
Mmp20P57748 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.46■■■□□ 2.15
Mmp20P57748 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.45■■■□□ 2.14
Mmp20P57748 Mir6538-201ENSMUST00000183713 110 ntBASIC28.44■■■□□ 2.14
Mmp20P57748 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Mmp20P57748 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Mmp20P57748 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Mmp20P57748 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Mmp20P57748 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
Mmp20P57748 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Mmp20P57748 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Mmp20P57748 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Mmp20P57748 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.4■■■□□ 2.14
Mmp20P57748 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.4■■■□□ 2.14
Mmp20P57748 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Mmp20P57748 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
Mmp20P57748 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Mmp20P57748 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Mmp20P57748 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
Mmp20P57748 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.38■■■□□ 2.13
Mmp20P57748 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Mmp20P57748 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Mmp20P57748 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.36■■■□□ 2.13
Mmp20P57748 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Mmp20P57748 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Mmp20P57748 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.33■■■□□ 2.13
Mmp20P57748 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Mmp20P57748 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Mmp20P57748 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Mmp20P57748 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Mmp20P57748 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.31■■■□□ 2.12
Mmp20P57748 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Mmp20P57748 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Mmp20P57748 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.31■■■□□ 2.12
Mmp20P57748 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Mmp20P57748 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Mmp20P57748 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
Mmp20P57748 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Mmp20P57748 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Mmp20P57748 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.25■■■□□ 2.11
Mmp20P57748 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.25■■■□□ 2.11
Mmp20P57748 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Mmp20P57748 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Mmp20P57748 Gm30023-201ENSMUST00000197970 889 ntBASIC28.23■■■□□ 2.11
Mmp20P57748 Gm6311-201ENSMUST00000073790 878 ntBASIC28.22■■■□□ 2.11
Mmp20P57748 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Mmp20P57748 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.21■■■□□ 2.11
Mmp20P57748 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Mmp20P57748 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Mmp20P57748 Cap2-205ENSMUST00000225824 1634 ntBASIC28.19■■■□□ 2.1
Mmp20P57748 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Mmp20P57748 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Mmp20P57748 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
Mmp20P57748 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Mmp20P57748 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Mmp20P57748 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Mmp20P57748 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Mmp20P57748 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Mmp20P57748 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms