Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Xcl1P47993 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC15.93■□□□□ 0.14
Xcl1P47993 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Xcl1P47993 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Xcl1P47993 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Xcl1P47993 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Xcl1P47993 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Xcl1P47993 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.91■□□□□ 0.14
Xcl1P47993 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Xcl1P47993 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Xcl1P47993 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Xcl1P47993 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Xcl1P47993 Gm20634-201ENSMUST00000090779 2956 ntBASIC15.9■□□□□ 0.14
Xcl1P47993 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Xcl1P47993 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Xcl1P47993 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Xcl1P47993 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Xcl1P47993 AC153911.1-202ENSMUST00000218534 1034 ntBASIC15.89■□□□□ 0.13
Xcl1P47993 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Xcl1P47993 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Xcl1P47993 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Xcl1P47993 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Xcl1P47993 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Xcl1P47993 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Xcl1P47993 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Xcl1P47993 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Xcl1P47993 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Xcl1P47993 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Xcl1P47993 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Xcl1P47993 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC15.86■□□□□ 0.13
Xcl1P47993 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Xcl1P47993 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Xcl1P47993 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC15.85■□□□□ 0.13
Xcl1P47993 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Xcl1P47993 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Xcl1P47993 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Xcl1P47993 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Xcl1P47993 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Xcl1P47993 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xcl1P47993 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Xcl1P47993 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Xcl1P47993 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Xcl1P47993 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xcl1P47993 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xcl1P47993 Gm6345-201ENSMUST00000180378 1691 ntBASIC15.81■□□□□ 0.12
Xcl1P47993 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xcl1P47993 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xcl1P47993 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xcl1P47993 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xcl1P47993 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xcl1P47993 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC15.8■□□□□ 0.12
Xcl1P47993 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xcl1P47993 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xcl1P47993 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Xcl1P47993 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Xcl1P47993 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Xcl1P47993 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
Xcl1P47993 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Xcl1P47993 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Xcl1P47993 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Xcl1P47993 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Xcl1P47993 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
Xcl1P47993 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Xcl1P47993 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.76■□□□□ 0.11
Xcl1P47993 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Xcl1P47993 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Xcl1P47993 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.76■□□□□ 0.11
Xcl1P47993 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Xcl1P47993 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Xcl1P47993 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Xcl1P47993 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Xcl1P47993 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Xcl1P47993 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Xcl1P47993 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Xcl1P47993 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Xcl1P47993 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Xcl1P47993 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Xcl1P47993 Gm24109-201ENSMUST00000175489 103 ntBASIC15.73■□□□□ 0.11
Xcl1P47993 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Xcl1P47993 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Xcl1P47993 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Xcl1P47993 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Xcl1P47993 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Xcl1P47993 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Xcl1P47993 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Xcl1P47993 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Xcl1P47993 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Xcl1P47993 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Xcl1P47993 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Xcl1P47993 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Xcl1P47993 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Xcl1P47993 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Xcl1P47993 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Xcl1P47993 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Xcl1P47993 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Xcl1P47993 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Xcl1P47993 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Xcl1P47993 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Xcl1P47993 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Xcl1P47993 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms