Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rplp1P47955 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rplp1P47955 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rplp1P47955 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rplp1P47955 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.68■□□□□ 0.74
Rplp1P47955 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.68■□□□□ 0.74
Rplp1P47955 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rplp1P47955 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rplp1P47955 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rplp1P47955 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.67■□□□□ 0.74
Rplp1P47955 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rplp1P47955 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rplp1P47955 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rplp1P47955 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rplp1P47955 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rplp1P47955 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rplp1P47955 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.65■□□□□ 0.74
Rplp1P47955 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.65■□□□□ 0.74
Rplp1P47955 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rplp1P47955 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rplp1P47955 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rplp1P47955 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rplp1P47955 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rplp1P47955 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rplp1P47955 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rplp1P47955 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rplp1P47955 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rplp1P47955 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rplp1P47955 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rplp1P47955 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rplp1P47955 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rplp1P47955 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rplp1P47955 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Rplp1P47955 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rplp1P47955 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rplp1P47955 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rplp1P47955 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rplp1P47955 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rplp1P47955 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rplp1P47955 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rplp1P47955 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rplp1P47955 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rplp1P47955 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rplp1P47955 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rplp1P47955 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rplp1P47955 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rplp1P47955 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rplp1P47955 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.55■□□□□ 0.72
Rplp1P47955 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rplp1P47955 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rplp1P47955 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.52■□□□□ 0.72
Rplp1P47955 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
Rplp1P47955 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Rplp1P47955 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rplp1P47955 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rplp1P47955 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rplp1P47955 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.5■□□□□ 0.71
Rplp1P47955 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Rplp1P47955 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rplp1P47955 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Rplp1P47955 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rplp1P47955 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rplp1P47955 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.49■□□□□ 0.71
Rplp1P47955 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rplp1P47955 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rplp1P47955 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rplp1P47955 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rplp1P47955 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.47■□□□□ 0.71
Rplp1P47955 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rplp1P47955 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rplp1P47955 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rplp1P47955 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rplp1P47955 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rplp1P47955 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rplp1P47955 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rplp1P47955 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rplp1P47955 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rplp1P47955 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rplp1P47955 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rplp1P47955 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rplp1P47955 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rplp1P47955 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rplp1P47955 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rplp1P47955 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rplp1P47955 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rplp1P47955 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rplp1P47955 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rplp1P47955 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rplp1P47955 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Rplp1P47955 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rplp1P47955 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rplp1P47955 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rplp1P47955 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rplp1P47955 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rplp1P47955 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rplp1P47955 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rplp1P47955 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rplp1P47955 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.39■□□□□ 0.69
Rplp1P47955 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rplp1P47955 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms