Protein–RNA interactions for Protein: P06327

Gm5629, Ig heavy chain V region VH558 A1/A4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5629P06327 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
Gm5629P06327 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Gm5629P06327 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Gm5629P06327 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5629P06327 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5629P06327 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.38■□□□□ 0.37
Gm5629P06327 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5629P06327 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm5629P06327 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm5629P06327 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm5629P06327 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm5629P06327 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm5629P06327 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm5629P06327 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm5629P06327 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gm5629P06327 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm5629P06327 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm5629P06327 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm5629P06327 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5629P06327 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
Gm5629P06327 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm5629P06327 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5629P06327 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm5629P06327 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Gm5629P06327 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Gm5629P06327 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5629P06327 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5629P06327 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm5629P06327 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm5629P06327 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5629P06327 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5629P06327 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Gm5629P06327 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Gm5629P06327 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm5629P06327 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm5629P06327 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Gm5629P06327 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5629P06327 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.26■□□□□ 0.35
Gm5629P06327 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5629P06327 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm5629P06327 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5629P06327 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5629P06327 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5629P06327 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm5629P06327 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm5629P06327 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5629P06327 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.24■□□□□ 0.35
Gm5629P06327 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5629P06327 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5629P06327 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm5629P06327 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm5629P06327 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5629P06327 Gm26115-201ENSMUST00000175605 87 ntBASIC17.23■□□□□ 0.35
Gm5629P06327 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm5629P06327 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5629P06327 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm5629P06327 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gm5629P06327 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5629P06327 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5629P06327 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5629P06327 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5629P06327 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm5629P06327 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5629P06327 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5629P06327 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm5629P06327 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5629P06327 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5629P06327 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5629P06327 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5629P06327 Gm8109-201ENSMUST00000194076 746 ntBASIC17.19■□□□□ 0.34
Gm5629P06327 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm5629P06327 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5629P06327 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.18■□□□□ 0.34
Gm5629P06327 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5629P06327 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm5629P06327 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.17■□□□□ 0.34
Gm5629P06327 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5629P06327 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5629P06327 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5629P06327 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5629P06327 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5629P06327 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5629P06327 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5629P06327 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5629P06327 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5629P06327 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5629P06327 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5629P06327 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm5629P06327 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5629P06327 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5629P06327 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5629P06327 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5629P06327 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5629P06327 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5629P06327 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5629P06327 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5629P06327 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm5629P06327 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm5629P06327 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5629P06327 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms