Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.86■■□□□ 1.73
PrnpP04925 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PrnpP04925 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PrnpP04925 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.85■■□□□ 1.73
PrnpP04925 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PrnpP04925 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.84■■□□□ 1.73
PrnpP04925 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PrnpP04925 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.82■■□□□ 1.72
PrnpP04925 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PrnpP04925 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PrnpP04925 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
PrnpP04925 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.81■■□□□ 1.72
PrnpP04925 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
PrnpP04925 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PrnpP04925 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PrnpP04925 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.78■■□□□ 1.72
PrnpP04925 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.77■■□□□ 1.72
PrnpP04925 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PrnpP04925 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.77■■□□□ 1.72
PrnpP04925 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PrnpP04925 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.77■■□□□ 1.72
PrnpP04925 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.76■■□□□ 1.71
PrnpP04925 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PrnpP04925 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PrnpP04925 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
PrnpP04925 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PrnpP04925 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
PrnpP04925 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PrnpP04925 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PrnpP04925 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PrnpP04925 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.72■■□□□ 1.71
PrnpP04925 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PrnpP04925 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PrnpP04925 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.72■■□□□ 1.71
PrnpP04925 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PrnpP04925 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PrnpP04925 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.71■■□□□ 1.71
PrnpP04925 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.7■■□□□ 1.7
PrnpP04925 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
PrnpP04925 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PrnpP04925 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.68■■□□□ 1.7
PrnpP04925 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PrnpP04925 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
PrnpP04925 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PrnpP04925 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.66■■□□□ 1.7
PrnpP04925 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
PrnpP04925 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PrnpP04925 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.65■■□□□ 1.7
PrnpP04925 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
PrnpP04925 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
PrnpP04925 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PrnpP04925 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PrnpP04925 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PrnpP04925 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PrnpP04925 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.62■■□□□ 1.69
PrnpP04925 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
PrnpP04925 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PrnpP04925 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.61■■□□□ 1.69
PrnpP04925 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PrnpP04925 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.6■■□□□ 1.69
PrnpP04925 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PrnpP04925 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
PrnpP04925 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.57■■□□□ 1.68
PrnpP04925 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PrnpP04925 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PrnpP04925 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PrnpP04925 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PrnpP04925 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PrnpP04925 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PrnpP04925 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PrnpP04925 Mir6538-201ENSMUST00000183713 110 ntBASIC25.52■■□□□ 1.68
PrnpP04925 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PrnpP04925 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PrnpP04925 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PrnpP04925 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.5■■□□□ 1.67
PrnpP04925 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PrnpP04925 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PrnpP04925 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PrnpP04925 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
PrnpP04925 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PrnpP04925 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PrnpP04925 Gm11175-201ENSMUST00000116172 543 ntBASIC25.47■■□□□ 1.67
PrnpP04925 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PrnpP04925 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PrnpP04925 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
PrnpP04925 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PrnpP04925 Gm30023-201ENSMUST00000197970 889 ntBASIC25.46■■□□□ 1.67
PrnpP04925 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
PrnpP04925 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
PrnpP04925 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PrnpP04925 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
PrnpP04925 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
PrnpP04925 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PrnpP04925 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PrnpP04925 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PrnpP04925 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PrnpP04925 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.44■■□□□ 1.66
PrnpP04925 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PrnpP04925 Particl-201ENSMUST00000205370 1560 ntBASIC25.42■■□□□ 1.66
PrnpP04925 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 170.6 ms