Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Igh-VJ558P01758 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Igh-VJ558P01758 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igh-VJ558P01758 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igh-VJ558P01758 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Igh-VJ558P01758 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igh-VJ558P01758 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igh-VJ558P01758 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Igh-VJ558P01758 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Igh-VJ558P01758 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.24■□□□□ 0.99
Igh-VJ558P01758 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igh-VJ558P01758 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Igh-VJ558P01758 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Igh-VJ558P01758 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.21■□□□□ 0.99
Igh-VJ558P01758 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igh-VJ558P01758 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Igh-VJ558P01758 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Igh-VJ558P01758 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.2■□□□□ 0.98
Igh-VJ558P01758 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.2■□□□□ 0.98
Igh-VJ558P01758 Gm9397-201ENSMUST00000200125 605 ntBASIC21.2■□□□□ 0.98
Igh-VJ558P01758 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igh-VJ558P01758 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igh-VJ558P01758 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Igh-VJ558P01758 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igh-VJ558P01758 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igh-VJ558P01758 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Igh-VJ558P01758 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Igh-VJ558P01758 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.18■□□□□ 0.98
Igh-VJ558P01758 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.18■□□□□ 0.98
Igh-VJ558P01758 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Igh-VJ558P01758 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igh-VJ558P01758 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igh-VJ558P01758 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.15■□□□□ 0.98
Igh-VJ558P01758 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.15■□□□□ 0.98
Igh-VJ558P01758 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Igh-VJ558P01758 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igh-VJ558P01758 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igh-VJ558P01758 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igh-VJ558P01758 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.13■□□□□ 0.97
Igh-VJ558P01758 Gm24970-201ENSMUST00000175582 82 ntBASIC21.13■□□□□ 0.97
Igh-VJ558P01758 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.13■□□□□ 0.97
Igh-VJ558P01758 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.13■□□□□ 0.97
Igh-VJ558P01758 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igh-VJ558P01758 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igh-VJ558P01758 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.11■□□□□ 0.97
Igh-VJ558P01758 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igh-VJ558P01758 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Igh-VJ558P01758 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igh-VJ558P01758 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igh-VJ558P01758 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Igh-VJ558P01758 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.1■□□□□ 0.97
Igh-VJ558P01758 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.09■□□□□ 0.97
Igh-VJ558P01758 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Igh-VJ558P01758 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Igh-VJ558P01758 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Igh-VJ558P01758 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igh-VJ558P01758 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igh-VJ558P01758 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Igh-VJ558P01758 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igh-VJ558P01758 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Igh-VJ558P01758 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igh-VJ558P01758 Gm45855-201ENSMUST00000212546 880 ntBASIC21.03■□□□□ 0.96
Igh-VJ558P01758 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igh-VJ558P01758 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igh-VJ558P01758 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igh-VJ558P01758 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igh-VJ558P01758 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.01■□□□□ 0.95
Igh-VJ558P01758 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.01■□□□□ 0.95
Igh-VJ558P01758 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igh-VJ558P01758 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Igh-VJ558P01758 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Igh-VJ558P01758 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igh-VJ558P01758 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.98■□□□□ 0.95
Igh-VJ558P01758 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Igh-VJ558P01758 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Igh-VJ558P01758 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Igh-VJ558P01758 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Igh-VJ558P01758 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Igh-VJ558P01758 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Igh-VJ558P01758 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Igh-VJ558P01758 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Igh-VJ558P01758 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Igh-VJ558P01758 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.94■□□□□ 0.94
Igh-VJ558P01758 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Igh-VJ558P01758 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Igh-VJ558P01758 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.93■□□□□ 0.94
Igh-VJ558P01758 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Igh-VJ558P01758 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Igh-VJ558P01758 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Igh-VJ558P01758 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Igh-VJ558P01758 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igh-VJ558P01758 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igh-VJ558P01758 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Igh-VJ558P01758 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Igh-VJ558P01758 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igh-VJ558P01758 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igh-VJ558P01758 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Igh-VJ558P01758 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Igh-VJ558P01758 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Igh-VJ558P01758 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms