Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Syn1O88935 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Syn1O88935 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
Syn1O88935 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Syn1O88935 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Syn1O88935 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.62■■□□□ 1.69
Syn1O88935 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Syn1O88935 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Syn1O88935 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Syn1O88935 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Syn1O88935 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Syn1O88935 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Syn1O88935 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Syn1O88935 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Syn1O88935 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Syn1O88935 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.57■■□□□ 1.68
Syn1O88935 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.56■■□□□ 1.68
Syn1O88935 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Syn1O88935 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Syn1O88935 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
Syn1O88935 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.56■■□□□ 1.68
Syn1O88935 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Syn1O88935 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Syn1O88935 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.55■■□□□ 1.68
Syn1O88935 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Syn1O88935 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Syn1O88935 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Syn1O88935 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.54■■□□□ 1.68
Syn1O88935 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Syn1O88935 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Syn1O88935 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.52■■□□□ 1.68
Syn1O88935 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Syn1O88935 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.51■■□□□ 1.67
Syn1O88935 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.49■■□□□ 1.67
Syn1O88935 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.49■■□□□ 1.67
Syn1O88935 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Syn1O88935 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Syn1O88935 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Syn1O88935 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Syn1O88935 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.47■■□□□ 1.67
Syn1O88935 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Syn1O88935 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.47■■□□□ 1.67
Syn1O88935 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Syn1O88935 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
Syn1O88935 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.45■■□□□ 1.66
Syn1O88935 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
Syn1O88935 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.44■■□□□ 1.66
Syn1O88935 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Syn1O88935 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Syn1O88935 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Syn1O88935 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.41■■□□□ 1.66
Syn1O88935 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Syn1O88935 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Syn1O88935 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Syn1O88935 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Syn1O88935 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Syn1O88935 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Syn1O88935 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Syn1O88935 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Syn1O88935 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.39■■□□□ 1.65
Syn1O88935 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.38■■□□□ 1.65
Syn1O88935 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Syn1O88935 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
Syn1O88935 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Syn1O88935 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.36■■□□□ 1.65
Syn1O88935 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.36■■□□□ 1.65
Syn1O88935 Gm12366-201ENSMUST00000121722 873 ntBASIC25.36■■□□□ 1.65
Syn1O88935 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.36■■□□□ 1.65
Syn1O88935 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.36■■□□□ 1.65
Syn1O88935 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Syn1O88935 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.36■■□□□ 1.65
Syn1O88935 Gm5786-201ENSMUST00000085368 882 ntBASIC25.36■■□□□ 1.65
Syn1O88935 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Syn1O88935 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.34■■□□□ 1.65
Syn1O88935 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Syn1O88935 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Syn1O88935 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
Syn1O88935 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Syn1O88935 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Syn1O88935 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.31■■□□□ 1.64
Syn1O88935 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Syn1O88935 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Syn1O88935 Scarna2-201ENSMUST00000157560 414 ntBASIC25.3■■□□□ 1.64
Syn1O88935 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.3■■□□□ 1.64
Syn1O88935 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Syn1O88935 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Syn1O88935 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Syn1O88935 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25.29■■□□□ 1.64
Syn1O88935 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Syn1O88935 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Syn1O88935 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Syn1O88935 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Syn1O88935 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.26■■□□□ 1.63
Syn1O88935 Gm11687-201ENSMUST00000118911 886 ntBASIC25.25■■□□□ 1.63
Syn1O88935 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Syn1O88935 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Syn1O88935 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Syn1O88935 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.21■■□□□ 1.63
Syn1O88935 Gm4799-201ENSMUST00000095396 657 ntBASIC25.21■■□□□ 1.63
Syn1O88935 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms