Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.96■■□□□ 1.11
Pcdh12O55134 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdh12O55134 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Pcdh12O55134 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh12O55134 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdh12O55134 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdh12O55134 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh12O55134 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh12O55134 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.92■■□□□ 1.1
Pcdh12O55134 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdh12O55134 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.91■■□□□ 1.1
Pcdh12O55134 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdh12O55134 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.9■■□□□ 1.1
Pcdh12O55134 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdh12O55134 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh12O55134 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.89■■□□□ 1.09
Pcdh12O55134 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh12O55134 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdh12O55134 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Pcdh12O55134 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh12O55134 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdh12O55134 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh12O55134 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.87■■□□□ 1.09
Pcdh12O55134 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh12O55134 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh12O55134 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdh12O55134 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.86■■□□□ 1.09
Pcdh12O55134 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh12O55134 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Pcdh12O55134 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.85■■□□□ 1.09
Pcdh12O55134 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Pcdh12O55134 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh12O55134 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Pcdh12O55134 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.84■■□□□ 1.09
Pcdh12O55134 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Pcdh12O55134 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Pcdh12O55134 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Pcdh12O55134 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdh12O55134 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh12O55134 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.79■■□□□ 1.08
Pcdh12O55134 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh12O55134 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh12O55134 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh12O55134 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.78■■□□□ 1.08
Pcdh12O55134 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdh12O55134 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh12O55134 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh12O55134 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh12O55134 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Pcdh12O55134 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.74■■□□□ 1.07
Pcdh12O55134 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh12O55134 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh12O55134 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh12O55134 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh12O55134 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdh12O55134 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh12O55134 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdh12O55134 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.73■■□□□ 1.07
Pcdh12O55134 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh12O55134 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Pcdh12O55134 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh12O55134 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh12O55134 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh12O55134 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdh12O55134 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh12O55134 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh12O55134 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh12O55134 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.69■■□□□ 1.06
Pcdh12O55134 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh12O55134 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh12O55134 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh12O55134 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh12O55134 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh12O55134 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh12O55134 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh12O55134 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh12O55134 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Pcdh12O55134 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.65■■□□□ 1.06
Pcdh12O55134 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh12O55134 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh12O55134 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh12O55134 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh12O55134 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh12O55134 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh12O55134 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh12O55134 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh12O55134 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh12O55134 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh12O55134 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdh12O55134 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh12O55134 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh12O55134 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pcdh12O55134 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh12O55134 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh12O55134 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh12O55134 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh12O55134 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Pcdh12O55134 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Pcdh12O55134 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh12O55134 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms