Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ScaperF8VQ70 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ScaperF8VQ70 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ScaperF8VQ70 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.3■■■□□ 2.6
ScaperF8VQ70 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
ScaperF8VQ70 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.29■■■□□ 2.6
ScaperF8VQ70 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
ScaperF8VQ70 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.28■■■□□ 2.6
ScaperF8VQ70 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
ScaperF8VQ70 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
ScaperF8VQ70 Gm11175-201ENSMUST00000116172 543 ntBASIC31.26■■■□□ 2.59
ScaperF8VQ70 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
ScaperF8VQ70 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ScaperF8VQ70 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ScaperF8VQ70 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ScaperF8VQ70 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
ScaperF8VQ70 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ScaperF8VQ70 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ScaperF8VQ70 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ScaperF8VQ70 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.22■■■□□ 2.59
ScaperF8VQ70 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ScaperF8VQ70 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ScaperF8VQ70 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
ScaperF8VQ70 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
ScaperF8VQ70 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
ScaperF8VQ70 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ScaperF8VQ70 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ScaperF8VQ70 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ScaperF8VQ70 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ScaperF8VQ70 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ScaperF8VQ70 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
ScaperF8VQ70 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
ScaperF8VQ70 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
ScaperF8VQ70 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
ScaperF8VQ70 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
ScaperF8VQ70 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
ScaperF8VQ70 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ScaperF8VQ70 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ScaperF8VQ70 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
ScaperF8VQ70 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
ScaperF8VQ70 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
ScaperF8VQ70 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.11■■■□□ 2.57
ScaperF8VQ70 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
ScaperF8VQ70 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ScaperF8VQ70 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
ScaperF8VQ70 Zxda-201ENSMUST00000117281 2621 ntBASIC31.08■■■□□ 2.57
ScaperF8VQ70 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.06■■■□□ 2.56
ScaperF8VQ70 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.06■■■□□ 2.56
ScaperF8VQ70 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
ScaperF8VQ70 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
ScaperF8VQ70 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
ScaperF8VQ70 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
ScaperF8VQ70 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
ScaperF8VQ70 Cap2-205ENSMUST00000225824 1634 ntBASIC31.04■■■□□ 2.56
ScaperF8VQ70 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.04■■■□□ 2.56
ScaperF8VQ70 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
ScaperF8VQ70 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
ScaperF8VQ70 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.01■■■□□ 2.55
ScaperF8VQ70 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
ScaperF8VQ70 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31■■■□□ 2.55
ScaperF8VQ70 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31■■■□□ 2.55
ScaperF8VQ70 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31■■■□□ 2.55
ScaperF8VQ70 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ScaperF8VQ70 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
ScaperF8VQ70 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
ScaperF8VQ70 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
ScaperF8VQ70 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
ScaperF8VQ70 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
ScaperF8VQ70 Gm9905-201ENSMUST00000065740 1845 ntBASIC30.97■■■□□ 2.55
ScaperF8VQ70 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.93■■■□□ 2.54
ScaperF8VQ70 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
ScaperF8VQ70 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
ScaperF8VQ70 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
ScaperF8VQ70 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
ScaperF8VQ70 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
ScaperF8VQ70 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
ScaperF8VQ70 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.91■■■□□ 2.54
ScaperF8VQ70 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
ScaperF8VQ70 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ScaperF8VQ70 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.9■■■□□ 2.54
ScaperF8VQ70 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.89■■■□□ 2.54
ScaperF8VQ70 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
ScaperF8VQ70 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.87■■■□□ 2.53
ScaperF8VQ70 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
ScaperF8VQ70 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
ScaperF8VQ70 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC30.86■■■□□ 2.53
ScaperF8VQ70 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
ScaperF8VQ70 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
ScaperF8VQ70 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
ScaperF8VQ70 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ScaperF8VQ70 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
ScaperF8VQ70 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
ScaperF8VQ70 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
ScaperF8VQ70 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.84■■■□□ 2.53
ScaperF8VQ70 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
ScaperF8VQ70 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ScaperF8VQ70 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC30.83■■■□□ 2.53
ScaperF8VQ70 Gm6206-201ENSMUST00000133472 2199 ntBASIC30.83■■■□□ 2.53
ScaperF8VQ70 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ScaperF8VQ70 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms