Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC12.46□□□□□ -0.41
Rnf213E9Q555 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rnf213E9Q555 AC167019.3-201ENSMUST00000228225 1266 ntBASIC12.45□□□□□ -0.42
Rnf213E9Q555 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf213E9Q555 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf213E9Q555 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf213E9Q555 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rnf213E9Q555 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.45□□□□□ -0.42
Rnf213E9Q555 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Rnf213E9Q555 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf213E9Q555 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rnf213E9Q555 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf213E9Q555 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf213E9Q555 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf213E9Q555 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf213E9Q555 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rnf213E9Q555 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf213E9Q555 AC131739.1-201ENSMUST00000221692 1245 ntBASIC12.43□□□□□ -0.42
Rnf213E9Q555 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf213E9Q555 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rnf213E9Q555 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Rnf213E9Q555 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf213E9Q555 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC12.42□□□□□ -0.42
Rnf213E9Q555 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf213E9Q555 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf213E9Q555 Gm9806-201ENSMUST00000051080 552 ntBASIC12.42□□□□□ -0.42
Rnf213E9Q555 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf213E9Q555 Gm30346-201ENSMUST00000218641 1699 ntBASIC12.42□□□□□ -0.42
Rnf213E9Q555 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC12.41□□□□□ -0.42
Rnf213E9Q555 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC12.41□□□□□ -0.42
Rnf213E9Q555 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC12.41□□□□□ -0.42
Rnf213E9Q555 Gm12366-201ENSMUST00000121722 873 ntBASIC12.41□□□□□ -0.42
Rnf213E9Q555 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC12.41□□□□□ -0.42
Rnf213E9Q555 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf213E9Q555 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC12.41□□□□□ -0.42
Rnf213E9Q555 Gm5786-201ENSMUST00000085368 882 ntBASIC12.41□□□□□ -0.42
Rnf213E9Q555 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf213E9Q555 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf213E9Q555 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf213E9Q555 Gm6345-201ENSMUST00000180378 1691 ntBASIC12.4□□□□□ -0.42
Rnf213E9Q555 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf213E9Q555 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf213E9Q555 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf213E9Q555 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf213E9Q555 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf213E9Q555 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rnf213E9Q555 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf213E9Q555 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf213E9Q555 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf213E9Q555 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rnf213E9Q555 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf213E9Q555 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf213E9Q555 Scarna2-201ENSMUST00000157560 414 ntBASIC12.36□□□□□ -0.43
Rnf213E9Q555 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf213E9Q555 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf213E9Q555 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf213E9Q555 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf213E9Q555 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf213E9Q555 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf213E9Q555 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf213E9Q555 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf213E9Q555 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf213E9Q555 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf213E9Q555 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC12.34□□□□□ -0.43
Rnf213E9Q555 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.34□□□□□ -0.43
Rnf213E9Q555 Gm11687-201ENSMUST00000118911 886 ntBASIC12.34□□□□□ -0.43
Rnf213E9Q555 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf213E9Q555 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf213E9Q555 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf213E9Q555 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf213E9Q555 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf213E9Q555 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf213E9Q555 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
Rnf213E9Q555 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rnf213E9Q555 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf213E9Q555 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf213E9Q555 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf213E9Q555 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf213E9Q555 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC12.31□□□□□ -0.44
Rnf213E9Q555 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf213E9Q555 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf213E9Q555 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.3□□□□□ -0.44
Rnf213E9Q555 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf213E9Q555 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.29□□□□□ -0.44
Rnf213E9Q555 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC12.29□□□□□ -0.44
Rnf213E9Q555 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Rnf213E9Q555 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Rnf213E9Q555 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Rnf213E9Q555 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf213E9Q555 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf213E9Q555 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf213E9Q555 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.27□□□□□ -0.44
Rnf213E9Q555 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf213E9Q555 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf213E9Q555 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf213E9Q555 Gm27502-201ENSMUST00000183495 199 ntBASIC12.26□□□□□ -0.45
Rnf213E9Q555 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf213E9Q555 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf213E9Q555 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.26□□□□□ -0.45
Rnf213E9Q555 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms