Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp27D3YV89 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp27D3YV89 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Mmp27D3YV89 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp27D3YV89 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp27D3YV89 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Mmp27D3YV89 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp27D3YV89 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp27D3YV89 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp27D3YV89 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Mmp27D3YV89 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp27D3YV89 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.15■□□□□ 0.82
Mmp27D3YV89 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp27D3YV89 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp27D3YV89 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp27D3YV89 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp27D3YV89 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp27D3YV89 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.13■□□□□ 0.81
Mmp27D3YV89 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mmp27D3YV89 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp27D3YV89 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mmp27D3YV89 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mmp27D3YV89 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Mmp27D3YV89 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mmp27D3YV89 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.09■□□□□ 0.81
Mmp27D3YV89 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp27D3YV89 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp27D3YV89 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp27D3YV89 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp27D3YV89 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp27D3YV89 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mmp27D3YV89 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.08■□□□□ 0.81
Mmp27D3YV89 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp27D3YV89 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp27D3YV89 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mmp27D3YV89 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mmp27D3YV89 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp27D3YV89 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp27D3YV89 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Mmp27D3YV89 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mmp27D3YV89 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp27D3YV89 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp27D3YV89 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Mmp27D3YV89 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.06■□□□□ 0.8
Mmp27D3YV89 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Mmp27D3YV89 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp27D3YV89 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mmp27D3YV89 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.06■□□□□ 0.8
Mmp27D3YV89 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Mmp27D3YV89 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.05■□□□□ 0.8
Mmp27D3YV89 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.05■□□□□ 0.8
Mmp27D3YV89 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp27D3YV89 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp27D3YV89 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mmp27D3YV89 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mmp27D3YV89 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Mmp27D3YV89 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mmp27D3YV89 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.03■□□□□ 0.8
Mmp27D3YV89 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Mmp27D3YV89 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Mmp27D3YV89 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mmp27D3YV89 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Mmp27D3YV89 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.99■□□□□ 0.79
Mmp27D3YV89 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Mmp27D3YV89 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Mmp27D3YV89 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Mmp27D3YV89 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp27D3YV89 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp27D3YV89 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Mmp27D3YV89 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Mmp27D3YV89 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp27D3YV89 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Mmp27D3YV89 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.94■□□□□ 0.78
Mmp27D3YV89 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Mmp27D3YV89 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.94■□□□□ 0.78
Mmp27D3YV89 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Mmp27D3YV89 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp27D3YV89 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Mmp27D3YV89 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp27D3YV89 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp27D3YV89 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp27D3YV89 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Mmp27D3YV89 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.92■□□□□ 0.78
Mmp27D3YV89 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Mmp27D3YV89 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Mmp27D3YV89 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
Mmp27D3YV89 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp27D3YV89 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Mmp27D3YV89 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Mmp27D3YV89 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.9■□□□□ 0.78
Mmp27D3YV89 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp27D3YV89 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp27D3YV89 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Mmp27D3YV89 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Mmp27D3YV89 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Mmp27D3YV89 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Mmp27D3YV89 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.88■□□□□ 0.77
Mmp27D3YV89 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Mmp27D3YV89 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Mmp27D3YV89 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms