Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Chd6A3KFM7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.76■□□□□ 0.91
Chd6A3KFM7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Chd6A3KFM7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Chd6A3KFM7 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chd6A3KFM7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.75■□□□□ 0.91
Chd6A3KFM7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.74■□□□□ 0.91
Chd6A3KFM7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Chd6A3KFM7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.74■□□□□ 0.91
Chd6A3KFM7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.74■□□□□ 0.91
Chd6A3KFM7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.73■□□□□ 0.91
Chd6A3KFM7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Chd6A3KFM7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd6A3KFM7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chd6A3KFM7 Gm4799-201ENSMUST00000095396 657 ntBASIC20.72■□□□□ 0.91
Chd6A3KFM7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Chd6A3KFM7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd6A3KFM7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chd6A3KFM7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Chd6A3KFM7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd6A3KFM7 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chd6A3KFM7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.69■□□□□ 0.9
Chd6A3KFM7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chd6A3KFM7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.68■□□□□ 0.9
Chd6A3KFM7 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.68■□□□□ 0.9
Chd6A3KFM7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.67■□□□□ 0.9
Chd6A3KFM7 Scarna2-201ENSMUST00000157560 414 ntBASIC20.67■□□□□ 0.9
Chd6A3KFM7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chd6A3KFM7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd6A3KFM7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.66■□□□□ 0.9
Chd6A3KFM7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd6A3KFM7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.66■□□□□ 0.9
Chd6A3KFM7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chd6A3KFM7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chd6A3KFM7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.64■□□□□ 0.9
Chd6A3KFM7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.64■□□□□ 0.9
Chd6A3KFM7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd6A3KFM7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd6A3KFM7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd6A3KFM7 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Chd6A3KFM7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.63■□□□□ 0.89
Chd6A3KFM7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
Chd6A3KFM7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.62■□□□□ 0.89
Chd6A3KFM7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Chd6A3KFM7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd6A3KFM7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd6A3KFM7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd6A3KFM7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd6A3KFM7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chd6A3KFM7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd6A3KFM7 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Chd6A3KFM7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd6A3KFM7 Gm7332-201ENSMUST00000118351 454 ntBASIC20.58■□□□□ 0.88
Chd6A3KFM7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.57■□□□□ 0.88
Chd6A3KFM7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.57■□□□□ 0.88
Chd6A3KFM7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Chd6A3KFM7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.56■□□□□ 0.88
Chd6A3KFM7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.55■□□□□ 0.88
Chd6A3KFM7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd6A3KFM7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd6A3KFM7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chd6A3KFM7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.54■□□□□ 0.88
Chd6A3KFM7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd6A3KFM7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd6A3KFM7 Gm11687-201ENSMUST00000118911 886 ntBASIC20.53■□□□□ 0.88
Chd6A3KFM7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chd6A3KFM7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chd6A3KFM7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chd6A3KFM7 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chd6A3KFM7 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.51■□□□□ 0.87
Chd6A3KFM7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd6A3KFM7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd6A3KFM7 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Chd6A3KFM7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Chd6A3KFM7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd6A3KFM7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd6A3KFM7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd6A3KFM7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd6A3KFM7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.48■□□□□ 0.87
Chd6A3KFM7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.48■□□□□ 0.87
Chd6A3KFM7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.48■□□□□ 0.87
Chd6A3KFM7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd6A3KFM7 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd6A3KFM7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd6A3KFM7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Chd6A3KFM7 Gm9806-201ENSMUST00000051080 552 ntBASIC20.46■□□□□ 0.87
Chd6A3KFM7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.45■□□□□ 0.86
Chd6A3KFM7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Chd6A3KFM7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd6A3KFM7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Chd6A3KFM7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Chd6A3KFM7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.43■□□□□ 0.86
Chd6A3KFM7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Chd6A3KFM7 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Chd6A3KFM7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.43■□□□□ 0.86
Chd6A3KFM7 Gm16437-201ENSMUST00000025669 507 ntBASIC20.43■□□□□ 0.86
Chd6A3KFM7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Chd6A3KFM7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.42■□□□□ 0.86
Chd6A3KFM7 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.42■□□□□ 0.86
Chd6A3KFM7 Gm15820-201ENSMUST00000201566 728 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms