Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Rab21-202ENSMUST00000218831 843 ntBASIC21.9■■□□□ 1.1
Smim17A0A504 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smim17A0A504 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smim17A0A504 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Smim17A0A504 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smim17A0A504 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smim17A0A504 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smim17A0A504 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smim17A0A504 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Smim17A0A504 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Smim17A0A504 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smim17A0A504 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Smim17A0A504 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Smim17A0A504 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Smim17A0A504 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smim17A0A504 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smim17A0A504 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Smim17A0A504 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smim17A0A504 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Smim17A0A504 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Smim17A0A504 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.86■■□□□ 1.09
Smim17A0A504 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smim17A0A504 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smim17A0A504 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.85■■□□□ 1.09
Smim17A0A504 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smim17A0A504 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Smim17A0A504 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.83■■□□□ 1.09
Smim17A0A504 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smim17A0A504 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smim17A0A504 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smim17A0A504 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smim17A0A504 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smim17A0A504 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smim17A0A504 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smim17A0A504 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Smim17A0A504 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smim17A0A504 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smim17A0A504 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Smim17A0A504 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.8■■□□□ 1.08
Smim17A0A504 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smim17A0A504 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smim17A0A504 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.79■■□□□ 1.08
Smim17A0A504 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.79■■□□□ 1.08
Smim17A0A504 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smim17A0A504 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smim17A0A504 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smim17A0A504 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.78■■□□□ 1.08
Smim17A0A504 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smim17A0A504 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Smim17A0A504 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.77■■□□□ 1.08
Smim17A0A504 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Smim17A0A504 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Smim17A0A504 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Smim17A0A504 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.76■■□□□ 1.07
Smim17A0A504 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smim17A0A504 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.74■■□□□ 1.07
Smim17A0A504 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smim17A0A504 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smim17A0A504 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.73■■□□□ 1.07
Smim17A0A504 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smim17A0A504 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smim17A0A504 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smim17A0A504 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smim17A0A504 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smim17A0A504 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Smim17A0A504 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smim17A0A504 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smim17A0A504 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smim17A0A504 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smim17A0A504 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Smim17A0A504 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Smim17A0A504 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smim17A0A504 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.7■■□□□ 1.06
Smim17A0A504 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smim17A0A504 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.7■■□□□ 1.06
Smim17A0A504 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smim17A0A504 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smim17A0A504 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smim17A0A504 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smim17A0A504 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smim17A0A504 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
Smim17A0A504 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smim17A0A504 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.67■■□□□ 1.06
Smim17A0A504 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smim17A0A504 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smim17A0A504 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smim17A0A504 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smim17A0A504 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smim17A0A504 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smim17A0A504 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smim17A0A504 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Smim17A0A504 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smim17A0A504 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smim17A0A504 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smim17A0A504 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Smim17A0A504 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smim17A0A504 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Smim17A0A504 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smim17A0A504 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Smim17A0A504 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms