Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav9d-4A0A0G2JG37 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.5■□□□□ 0.23
Trav9d-4A0A0G2JG37 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-4A0A0G2JG37 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav9d-4A0A0G2JG37 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-4A0A0G2JG37 Gm30346-201ENSMUST00000218641 1699 ntBASIC16.49■□□□□ 0.23
Trav9d-4A0A0G2JG37 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9d-4A0A0G2JG37 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav9d-4A0A0G2JG37 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav9d-4A0A0G2JG37 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav9d-4A0A0G2JG37 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9d-4A0A0G2JG37 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9d-4A0A0G2JG37 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-4A0A0G2JG37 AC166822.3-201ENSMUST00000227394 661 ntBASIC16.46■□□□□ 0.23
Trav9d-4A0A0G2JG37 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-4A0A0G2JG37 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Trav9d-4A0A0G2JG37 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9d-4A0A0G2JG37 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trav9d-4A0A0G2JG37 Gm27322-201ENSMUST00000184007 104 ntBASIC16.43■□□□□ 0.22
Trav9d-4A0A0G2JG37 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-4A0A0G2JG37 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-4A0A0G2JG37 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-4A0A0G2JG37 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-4A0A0G2JG37 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-4A0A0G2JG37 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-4A0A0G2JG37 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-4A0A0G2JG37 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trav9d-4A0A0G2JG37 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav9d-4A0A0G2JG37 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-4A0A0G2JG37 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-4A0A0G2JG37 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-4A0A0G2JG37 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-4A0A0G2JG37 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trav9d-4A0A0G2JG37 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-4A0A0G2JG37 Gm17082-201ENSMUST00000166043 1091 ntBASIC16.4■□□□□ 0.22
Trav9d-4A0A0G2JG37 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC16.4■□□□□ 0.22
Trav9d-4A0A0G2JG37 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-4A0A0G2JG37 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-4A0A0G2JG37 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-4A0A0G2JG37 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav9d-4A0A0G2JG37 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.38■□□□□ 0.21
Trav9d-4A0A0G2JG37 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav9d-4A0A0G2JG37 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-4A0A0G2JG37 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-4A0A0G2JG37 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Trav9d-4A0A0G2JG37 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-4A0A0G2JG37 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav9d-4A0A0G2JG37 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
Trav9d-4A0A0G2JG37 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-4A0A0G2JG37 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav9d-4A0A0G2JG37 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-4A0A0G2JG37 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-4A0A0G2JG37 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-4A0A0G2JG37 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-4A0A0G2JG37 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-4A0A0G2JG37 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-4A0A0G2JG37 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-4A0A0G2JG37 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Trav9d-4A0A0G2JG37 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trav9d-4A0A0G2JG37 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-4A0A0G2JG37 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav9d-4A0A0G2JG37 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-4A0A0G2JG37 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-4A0A0G2JG37 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav9d-4A0A0G2JG37 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-4A0A0G2JG37 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-4A0A0G2JG37 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-4A0A0G2JG37 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-4A0A0G2JG37 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Trav9d-4A0A0G2JG37 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-4A0A0G2JG37 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-4A0A0G2JG37 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9d-4A0A0G2JG37 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trav9d-4A0A0G2JG37 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9d-4A0A0G2JG37 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9d-4A0A0G2JG37 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav9d-4A0A0G2JG37 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-4A0A0G2JG37 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-4A0A0G2JG37 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav9d-4A0A0G2JG37 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-4A0A0G2JG37 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-4A0A0G2JG37 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-4A0A0G2JG37 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-4A0A0G2JG37 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9d-4A0A0G2JG37 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trav9d-4A0A0G2JG37 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-4A0A0G2JG37 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
Trav9d-4A0A0G2JG37 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav9d-4A0A0G2JG37 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-4A0A0G2JG37 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9d-4A0A0G2JG37 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9d-4A0A0G2JG37 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.27■□□□□ 0.19
Trav9d-4A0A0G2JG37 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav9d-4A0A0G2JG37 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Trav9d-4A0A0G2JG37 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-4A0A0G2JG37 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav9d-4A0A0G2JG37 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Trav9d-4A0A0G2JG37 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Trav9d-4A0A0G2JG37 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9d-4A0A0G2JG37 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms