Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav7-1A0A0G2JEV5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trav7-1A0A0G2JEV5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav7-1A0A0G2JEV5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trav7-1A0A0G2JEV5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav7-1A0A0G2JEV5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7-1A0A0G2JEV5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Trav7-1A0A0G2JEV5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7-1A0A0G2JEV5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7-1A0A0G2JEV5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7-1A0A0G2JEV5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav7-1A0A0G2JEV5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-1A0A0G2JEV5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-1A0A0G2JEV5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-1A0A0G2JEV5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Trav7-1A0A0G2JEV5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav7-1A0A0G2JEV5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
Trav7-1A0A0G2JEV5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav7-1A0A0G2JEV5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trav7-1A0A0G2JEV5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7-1A0A0G2JEV5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7-1A0A0G2JEV5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav7-1A0A0G2JEV5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7-1A0A0G2JEV5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav7-1A0A0G2JEV5 Gm24804-201ENSMUST00000174982 85 ntBASIC18.57■□□□□ 0.56
Trav7-1A0A0G2JEV5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trav7-1A0A0G2JEV5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav7-1A0A0G2JEV5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7-1A0A0G2JEV5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7-1A0A0G2JEV5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trav7-1A0A0G2JEV5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7-1A0A0G2JEV5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.54■□□□□ 0.56
Trav7-1A0A0G2JEV5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-1A0A0G2JEV5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-1A0A0G2JEV5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7-1A0A0G2JEV5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.53■□□□□ 0.56
Trav7-1A0A0G2JEV5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7-1A0A0G2JEV5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7-1A0A0G2JEV5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav7-1A0A0G2JEV5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trav7-1A0A0G2JEV5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.53■□□□□ 0.56
Trav7-1A0A0G2JEV5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav7-1A0A0G2JEV5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-1A0A0G2JEV5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-1A0A0G2JEV5 Gm16148-201ENSMUST00000119653 893 ntBASIC18.51■□□□□ 0.55
Trav7-1A0A0G2JEV5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-1A0A0G2JEV5 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.51■□□□□ 0.55
Trav7-1A0A0G2JEV5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-1A0A0G2JEV5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-1A0A0G2JEV5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-1A0A0G2JEV5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-1A0A0G2JEV5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-1A0A0G2JEV5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-1A0A0G2JEV5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-1A0A0G2JEV5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-1A0A0G2JEV5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
Trav7-1A0A0G2JEV5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-1A0A0G2JEV5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Trav7-1A0A0G2JEV5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-1A0A0G2JEV5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7-1A0A0G2JEV5 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7-1A0A0G2JEV5 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7-1A0A0G2JEV5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav7-1A0A0G2JEV5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Trav7-1A0A0G2JEV5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trav7-1A0A0G2JEV5 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-1A0A0G2JEV5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-1A0A0G2JEV5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-1A0A0G2JEV5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-1A0A0G2JEV5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.47■□□□□ 0.55
Trav7-1A0A0G2JEV5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.46■□□□□ 0.55
Trav7-1A0A0G2JEV5 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Trav7-1A0A0G2JEV5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.45■□□□□ 0.54
Trav7-1A0A0G2JEV5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Trav7-1A0A0G2JEV5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-1A0A0G2JEV5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-1A0A0G2JEV5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7-1A0A0G2JEV5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7-1A0A0G2JEV5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7-1A0A0G2JEV5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav7-1A0A0G2JEV5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.43■□□□□ 0.54
Trav7-1A0A0G2JEV5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7-1A0A0G2JEV5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7-1A0A0G2JEV5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trav7-1A0A0G2JEV5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7-1A0A0G2JEV5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Trav7-1A0A0G2JEV5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-1A0A0G2JEV5 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-1A0A0G2JEV5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-1A0A0G2JEV5 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Trav7-1A0A0G2JEV5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7-1A0A0G2JEV5 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trav7-1A0A0G2JEV5 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7-1A0A0G2JEV5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7-1A0A0G2JEV5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav7-1A0A0G2JEV5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-1A0A0G2JEV5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-1A0A0G2JEV5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-1A0A0G2JEV5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7-1A0A0G2JEV5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms