Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17,11■□□□□ 0,33
Igkv4-78A0A0A6YYE5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17,11■□□□□ 0,33
Igkv4-78A0A0A6YYE5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17,1■□□□□ 0,33
Igkv4-78A0A0A6YYE5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17,1■□□□□ 0,33
Igkv4-78A0A0A6YYE5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17,1■□□□□ 0,33
Igkv4-78A0A0A6YYE5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17,09■□□□□ 0,33
Igkv4-78A0A0A6YYE5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17,09■□□□□ 0,33
Igkv4-78A0A0A6YYE5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17,08■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17,08■□□□□ 0,32
Igkv4-78A0A0A6YYE5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17,07■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17,06■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17,06■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17,06■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17,06■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17,05■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17,05■□□□□ 0,32
Igkv4-78A0A0A6YYE5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17,05■□□□□ 0,32
Igkv4-78A0A0A6YYE5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC17,05■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17,04■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17,04■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17,04■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17,04■□□□□ 0,32
Igkv4-78A0A0A6YYE5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17,03■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17,03■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17,03■□□□□ 0,32
Igkv4-78A0A0A6YYE5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17,03■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17,02■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17,02■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17,02■□□□□ 0,32
Igkv4-78A0A0A6YYE5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17,02■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17,01■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17,01■□□□□ 0,31
Igkv4-78A0A0A6YYE5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17,01■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17,01■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17,01■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC17■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16,99■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC16,99■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC16,99■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16,99■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC16,98■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16,98■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16,98■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16,98■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16,98■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16,97■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16,97■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16,97■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16,97■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC16,96■□□□□ 0,31
Igkv4-78A0A0A6YYE5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16,96■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16,96■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16,96■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC16,95■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16,95■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16,95■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16,95■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16,95■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC16,94■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16,94■□□□□ 0,3
Igkv4-78A0A0A6YYE5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16,94■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC16,93■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16,93■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16,93■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC16,92■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16,92■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC16,92■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16,92■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16,92■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16,92■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16,92■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16,91■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16,9■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16,9■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16,9■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16,9■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16,89■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16,89■□□□□ 0,3
Igkv4-78A0A0A6YYE5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16,89■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Gm24804-201ENSMUST00000174982 85 ntBASIC16,89■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16,89■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16,89■□□□□ 0,29
Igkv4-78A0A0A6YYE5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16,88■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16,88■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC16,88■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16,88■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16,88■□□□□ 0,29
Igkv4-78A0A0A6YYE5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16,88■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16,88■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16,87■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC16,87■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Pcf11-205ENSMUST00000208255 1720 ntBASIC16,87■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16,86■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16,86■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16,86■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16,86■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16,86■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16,86■□□□□ 0,29
Igkv4-78A0A0A6YYE5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16,86■□□□□ 0,29
Retrieved 100 of 76,532 protein–RNA pairs in 15,7 ms