Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Amer2-203ENSMUST00000225247 2662 ntBASIC22.34■■□□□ 1.17
Trbc1A0A0A6YWV4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Trbc1A0A0A6YWV4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trbc1A0A0A6YWV4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trbc1A0A0A6YWV4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trbc1A0A0A6YWV4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Trbc1A0A0A6YWV4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trbc1A0A0A6YWV4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trbc1A0A0A6YWV4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trbc1A0A0A6YWV4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trbc1A0A0A6YWV4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trbc1A0A0A6YWV4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trbc1A0A0A6YWV4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trbc1A0A0A6YWV4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Trbc1A0A0A6YWV4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Trbc1A0A0A6YWV4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trbc1A0A0A6YWV4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trbc1A0A0A6YWV4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trbc1A0A0A6YWV4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trbc1A0A0A6YWV4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.26■■□□□ 1.15
Trbc1A0A0A6YWV4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.24■■□□□ 1.15
Trbc1A0A0A6YWV4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trbc1A0A0A6YWV4 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.23■■□□□ 1.15
Trbc1A0A0A6YWV4 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Trbc1A0A0A6YWV4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.22■■□□□ 1.15
Trbc1A0A0A6YWV4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trbc1A0A0A6YWV4 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trbc1A0A0A6YWV4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trbc1A0A0A6YWV4 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Trbc1A0A0A6YWV4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.21■■□□□ 1.15
Trbc1A0A0A6YWV4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.21■■□□□ 1.15
Trbc1A0A0A6YWV4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trbc1A0A0A6YWV4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Trbc1A0A0A6YWV4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Trbc1A0A0A6YWV4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trbc1A0A0A6YWV4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trbc1A0A0A6YWV4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.19■■□□□ 1.14
Trbc1A0A0A6YWV4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trbc1A0A0A6YWV4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.19■■□□□ 1.14
Trbc1A0A0A6YWV4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trbc1A0A0A6YWV4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trbc1A0A0A6YWV4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trbc1A0A0A6YWV4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trbc1A0A0A6YWV4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.15■■□□□ 1.14
Trbc1A0A0A6YWV4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trbc1A0A0A6YWV4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trbc1A0A0A6YWV4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trbc1A0A0A6YWV4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trbc1A0A0A6YWV4 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trbc1A0A0A6YWV4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trbc1A0A0A6YWV4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trbc1A0A0A6YWV4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Trbc1A0A0A6YWV4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.11■■□□□ 1.13
Trbc1A0A0A6YWV4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trbc1A0A0A6YWV4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trbc1A0A0A6YWV4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Trbc1A0A0A6YWV4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trbc1A0A0A6YWV4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trbc1A0A0A6YWV4 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trbc1A0A0A6YWV4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.09■■□□□ 1.13
Trbc1A0A0A6YWV4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Trbc1A0A0A6YWV4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trbc1A0A0A6YWV4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trbc1A0A0A6YWV4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trbc1A0A0A6YWV4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trbc1A0A0A6YWV4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.07■■□□□ 1.12
Trbc1A0A0A6YWV4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trbc1A0A0A6YWV4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.06■■□□□ 1.12
Trbc1A0A0A6YWV4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trbc1A0A0A6YWV4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trbc1A0A0A6YWV4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trbc1A0A0A6YWV4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trbc1A0A0A6YWV4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trbc1A0A0A6YWV4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trbc1A0A0A6YWV4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Trbc1A0A0A6YWV4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trbc1A0A0A6YWV4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trbc1A0A0A6YWV4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.02■■□□□ 1.12
Trbc1A0A0A6YWV4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trbc1A0A0A6YWV4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.01■■□□□ 1.11
Trbc1A0A0A6YWV4 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trbc1A0A0A6YWV4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Trbc1A0A0A6YWV4 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trbc1A0A0A6YWV4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trbc1A0A0A6YWV4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trbc1A0A0A6YWV4 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.99■■□□□ 1.11
Trbc1A0A0A6YWV4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.99■■□□□ 1.11
Trbc1A0A0A6YWV4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trbc1A0A0A6YWV4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trbc1A0A0A6YWV4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.98■■□□□ 1.11
Trbc1A0A0A6YWV4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trbc1A0A0A6YWV4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trbc1A0A0A6YWV4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Trbc1A0A0A6YWV4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trbc1A0A0A6YWV4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trbc1A0A0A6YWV4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trbc1A0A0A6YWV4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trbc1A0A0A6YWV4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trbc1A0A0A6YWV4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.96■■□□□ 1.11
Trbc1A0A0A6YWV4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms