Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trav4-4-dv10A0A075B651 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.9■□□□□ 0.62
Trav4-4-dv10A0A075B651 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav4-4-dv10A0A075B651 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.9■□□□□ 0.62
Trav4-4-dv10A0A075B651 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.9■□□□□ 0.62
Trav4-4-dv10A0A075B651 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trav4-4-dv10A0A075B651 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trav4-4-dv10A0A075B651 Gm26115-201ENSMUST00000175605 87 ntBASIC18.89■□□□□ 0.61
Trav4-4-dv10A0A075B651 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trav4-4-dv10A0A075B651 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trav4-4-dv10A0A075B651 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav4-4-dv10A0A075B651 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav4-4-dv10A0A075B651 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav4-4-dv10A0A075B651 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav4-4-dv10A0A075B651 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav4-4-dv10A0A075B651 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav4-4-dv10A0A075B651 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav4-4-dv10A0A075B651 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav4-4-dv10A0A075B651 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav4-4-dv10A0A075B651 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trav4-4-dv10A0A075B651 Gm8109-201ENSMUST00000194076 746 ntBASIC18.86■□□□□ 0.61
Trav4-4-dv10A0A075B651 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav4-4-dv10A0A075B651 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav4-4-dv10A0A075B651 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trav4-4-dv10A0A075B651 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav4-4-dv10A0A075B651 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trav4-4-dv10A0A075B651 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav4-4-dv10A0A075B651 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trav4-4-dv10A0A075B651 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav4-4-dv10A0A075B651 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav4-4-dv10A0A075B651 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav4-4-dv10A0A075B651 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav4-4-dv10A0A075B651 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav4-4-dv10A0A075B651 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav4-4-dv10A0A075B651 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.83■□□□□ 0.61
Trav4-4-dv10A0A075B651 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav4-4-dv10A0A075B651 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav4-4-dv10A0A075B651 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav4-4-dv10A0A075B651 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav4-4-dv10A0A075B651 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.82■□□□□ 0.6
Trav4-4-dv10A0A075B651 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav4-4-dv10A0A075B651 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav4-4-dv10A0A075B651 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav4-4-dv10A0A075B651 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.81■□□□□ 0.6
Trav4-4-dv10A0A075B651 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav4-4-dv10A0A075B651 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav4-4-dv10A0A075B651 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav4-4-dv10A0A075B651 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Trav4-4-dv10A0A075B651 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav4-4-dv10A0A075B651 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav4-4-dv10A0A075B651 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav4-4-dv10A0A075B651 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav4-4-dv10A0A075B651 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav4-4-dv10A0A075B651 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav4-4-dv10A0A075B651 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav4-4-dv10A0A075B651 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav4-4-dv10A0A075B651 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav4-4-dv10A0A075B651 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav4-4-dv10A0A075B651 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trav4-4-dv10A0A075B651 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav4-4-dv10A0A075B651 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav4-4-dv10A0A075B651 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Trav4-4-dv10A0A075B651 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav4-4-dv10A0A075B651 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav4-4-dv10A0A075B651 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav4-4-dv10A0A075B651 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav4-4-dv10A0A075B651 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav4-4-dv10A0A075B651 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.74■□□□□ 0.59
Trav4-4-dv10A0A075B651 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav4-4-dv10A0A075B651 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav4-4-dv10A0A075B651 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav4-4-dv10A0A075B651 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav4-4-dv10A0A075B651 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav4-4-dv10A0A075B651 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Trav4-4-dv10A0A075B651 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trav4-4-dv10A0A075B651 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav4-4-dv10A0A075B651 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav4-4-dv10A0A075B651 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav4-4-dv10A0A075B651 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav4-4-dv10A0A075B651 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav4-4-dv10A0A075B651 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Trav4-4-dv10A0A075B651 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav4-4-dv10A0A075B651 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav4-4-dv10A0A075B651 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trav4-4-dv10A0A075B651 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav4-4-dv10A0A075B651 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav4-4-dv10A0A075B651 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav4-4-dv10A0A075B651 Gm16148-201ENSMUST00000119653 893 ntBASIC18.64■□□□□ 0.57
Trav4-4-dv10A0A075B651 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.64■□□□□ 0.57
Trav4-4-dv10A0A075B651 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav4-4-dv10A0A075B651 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav4-4-dv10A0A075B651 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trav4-4-dv10A0A075B651 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav4-4-dv10A0A075B651 Gm24804-201ENSMUST00000174982 85 ntBASIC18.62■□□□□ 0.57
Trav4-4-dv10A0A075B651 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav4-4-dv10A0A075B651 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav4-4-dv10A0A075B651 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav4-4-dv10A0A075B651 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav4-4-dv10A0A075B651 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav4-4-dv10A0A075B651 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms