Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav6-6A0A075B603 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav6-6A0A075B603 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-6A0A075B603 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-6A0A075B603 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-6A0A075B603 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-6A0A075B603 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-6A0A075B603 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-6A0A075B603 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-6A0A075B603 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-6A0A075B603 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-6A0A075B603 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-6A0A075B603 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-6A0A075B603 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-6A0A075B603 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.85■□□□□ 0.45
Trav6-6A0A075B603 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-6A0A075B603 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.84■□□□□ 0.45
Trav6-6A0A075B603 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-6A0A075B603 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6-6A0A075B603 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC17.83■□□□□ 0.44
Trav6-6A0A075B603 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav6-6A0A075B603 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-6A0A075B603 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-6A0A075B603 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-6A0A075B603 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-6A0A075B603 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-6A0A075B603 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-6A0A075B603 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-6A0A075B603 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-6A0A075B603 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.8■□□□□ 0.44
Trav6-6A0A075B603 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-6A0A075B603 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-6A0A075B603 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-6A0A075B603 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.79■□□□□ 0.44
Trav6-6A0A075B603 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-6A0A075B603 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-6A0A075B603 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-6A0A075B603 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav6-6A0A075B603 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav6-6A0A075B603 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-6A0A075B603 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav6-6A0A075B603 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-6A0A075B603 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-6A0A075B603 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-6A0A075B603 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trav6-6A0A075B603 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-6A0A075B603 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-6A0A075B603 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6-6A0A075B603 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav6-6A0A075B603 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Trav6-6A0A075B603 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-6A0A075B603 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav6-6A0A075B603 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav6-6A0A075B603 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-6A0A075B603 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-6A0A075B603 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-6A0A075B603 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav6-6A0A075B603 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-6A0A075B603 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trav6-6A0A075B603 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-6A0A075B603 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav6-6A0A075B603 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-6A0A075B603 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-6A0A075B603 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-6A0A075B603 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-6A0A075B603 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-6A0A075B603 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav6-6A0A075B603 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav6-6A0A075B603 Gm24804-201ENSMUST00000174982 85 ntBASIC17.72■□□□□ 0.43
Trav6-6A0A075B603 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav6-6A0A075B603 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-6A0A075B603 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-6A0A075B603 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-6A0A075B603 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav6-6A0A075B603 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Trav6-6A0A075B603 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Trav6-6A0A075B603 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav6-6A0A075B603 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trav6-6A0A075B603 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.69■□□□□ 0.42
Trav6-6A0A075B603 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trav6-6A0A075B603 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.69■□□□□ 0.42
Trav6-6A0A075B603 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav6-6A0A075B603 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-6A0A075B603 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-6A0A075B603 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-6A0A075B603 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-6A0A075B603 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav6-6A0A075B603 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav6-6A0A075B603 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav6-6A0A075B603 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-6A0A075B603 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav6-6A0A075B603 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-6A0A075B603 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav6-6A0A075B603 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav6-6A0A075B603 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav6-6A0A075B603 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-6A0A075B603 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-6A0A075B603 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav6-6A0A075B603 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav6-6A0A075B603 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms