Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 UQCRBP3-201ENST00000509483 312 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 AP000424.1-201ENST00000521851 558 ntTSL 4 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 NFRKB-205ENST00000526940 539 ntTSL 2 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC018410.1-202ENST00000545474 492 ntTSL 2 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC079907.2-201ENST00000550307 1034 ntTSL 3 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 LINC02304-201ENST00000554445 445 ntTSL 3 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 RN7SL192P-201ENST00000584303 299 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC020908.3-201ENST00000597045 610 ntTSL 3 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC008687.3-201ENST00000599209 598 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 DPPA5P1-201ENST00000600430 340 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC113143.2-201ENST00000603849 394 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 BNIP3P37-201ENST00000604107 901 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 BNIP3P15-201ENST00000604600 301 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC025518.2-201ENST00000605229 492 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC092175.1-201ENST00000605325 200 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 RN7SL620P-201ENST00000610816 303 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 ATF3-210ENST00000613104 581 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC002094.4-201ENST00000613598 307 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 Metazoa_SRP.197-201ENST00000618956 303 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 AP003108.5-201ENST00000623008 895 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC010507.2-201ENST00000632795 676 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC127459.1-201ENST00000563129 2768 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 NELL2-212ENST00000549027 3036 ntTSL 5 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 Z97832.2-201ENST00000605896 4261 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SNX18Q96RF0 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 AC093616.1-201ENST00000427434 2095 ntBASIC8.22□□□□□ -1.09
SNX18Q96RF0 HM13-224ENST00000498035 3932 ntTSL 2 BASIC8.22□□□□□ -1.09
SNX18Q96RF0 FTO-217ENST00000637001 1609 ntTSL 5 BASIC8.21□□□□□ -1.09
SNX18Q96RF0 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SNX18Q96RF0 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC8.21□□□□□ -1.09
SNX18Q96RF0 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SNX18Q96RF0 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.09
SNX18Q96RF0 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SNX18Q96RF0 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.21□□□□□ -1.09
SNX18Q96RF0 ZNF80-203ENST00000619534 2216 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
SNX18Q96RF0 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.21□□□□□ -1.09
SNX18Q96RF0 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SNX18Q96RF0 NOL8-229ENST00000545558 4343 ntAPPRIS P3 TSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 RNASE3-201ENST00000304639 720 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNX18Q96RF0 SMIM9-201ENST00000369529 904 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 ERICH2-201ENST00000409885 601 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AL450322.1-201ENST00000415358 313 ntTSL 3 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 BX470209.1-201ENST00000421297 916 ntTSL 3 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AL589935.1-204ENST00000423255 407 ntTSL 3 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 Z73361.1-201ENST00000423690 612 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 AL161447.1-201ENST00000427811 230 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AL137793.1-201ENST00000433734 599 ntTSL 3 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC009365.1-201ENST00000436379 751 ntTSL 2 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 LINC01054-201ENST00000446989 514 ntTSL 3 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC097493.2-201ENST00000468675 780 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 PIGA-205ENST00000482148 1092 ntTSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 RN7SL384P-201ENST00000490382 298 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 RN7SL34P-201ENST00000497296 270 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC100860.1-201ENST00000517606 1064 ntTSL 4 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC103719.1-201ENST00000517994 581 ntTSL 4 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 HAVCR2-204ENST00000522593 975 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 LINC02439-201ENST00000538783 450 ntTSL 3 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC073176.1-201ENST00000560700 534 ntTSL 4 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 BMF-210ENST00000561360 735 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC005829.1-202ENST00000562555 298 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC007608.3-202ENST00000570241 1109 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SNX18Q96RF0 SHBG-218ENST00000576728 776 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SNX18Q96RF0 LGALS9DP-201ENST00000580112 764 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC119868.2-201ENST00000583991 432 ntTSL 3 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 MZT1P1-201ENST00000603781 246 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 AC097717.1-251ENST00000608419 183 ntTSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 AL512638.3-201ENST00000620370 298 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 AP001469.1-202ENST00000626933 695 ntTSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 FRG2LP-201ENST00000586090 1563 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SNX18Q96RF0 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SNX18Q96RF0 EEF1A1P8-201ENST00000419025 1388 ntBASIC8.21□□□□□ -1.1
SNX18Q96RF0 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.21□□□□□ -1.1
SNX18Q96RF0 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC8.2□□□□□ -1.1
SNX18Q96RF0 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SNX18Q96RF0 DNAJC27-AS1-205ENST00000434897 4660 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms