Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm14982-201ENSMUST00000121102 442 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm15877-201ENSMUST00000121897 964 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Klra13-ps-201ENSMUST00000125813 802 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Sox1P53783 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC6.74□□□□□ -1.33
Sox1P53783 Gm17155-201ENSMUST00000165969 473 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm6395-201ENSMUST00000167639 691 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Mir5103-201ENSMUST00000175111 79 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm22252-201ENSMUST00000179316 79 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm27152-201ENSMUST00000183828 99 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm9320-201ENSMUST00000184151 473 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm27286-201ENSMUST00000184934 179 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm21654-201ENSMUST00000188086 691 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm18407-201ENSMUST00000192126 790 ntBASIC6.74□□□□□ -1.33
Sox1P53783 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox1P53783 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.74□□□□□ -1.33
Sox1P53783 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox1P53783 Gm43631-201ENSMUST00000202011 369 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.74□□□□□ -1.33
Sox1P53783 Gm17987-201ENSMUST00000206902 603 ntBASIC6.74□□□□□ -1.33
Sox1P53783 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox1P53783 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC6.74□□□□□ -1.33
Sox1P53783 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox1P53783 Gm4057-201ENSMUST00000221407 368 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.74□□□□□ -1.33
Sox1P53783 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC6.74□□□□□ -1.33
Sox1P53783 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Sox1P53783 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Gm22865-201ENSMUST00000083949 214 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.74□□□□□ -1.33
Sox1P53783 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Sox1P53783 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
Sox1P53783 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Sox1P53783 Gm37786-201ENSMUST00000191714 3225 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.74□□□□□ -1.33
Sox1P53783 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Sox1P53783 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm43314-201ENSMUST00000196744 2231 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm37530-201ENSMUST00000191759 4932 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Klf10-202ENSMUST00000226363 2917 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Gm23948-201ENSMUST00000104030 132 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm24835-201ENSMUST00000116777 111 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm22488-201ENSMUST00000116811 127 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm15332-201ENSMUST00000118386 357 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm12294-201ENSMUST00000119723 490 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm11484-201ENSMUST00000119808 338 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm13743-201ENSMUST00000121486 724 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm12041-201ENSMUST00000121606 602 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm13602-201ENSMUST00000122405 493 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Gm25152-201ENSMUST00000157117 114 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm17223-201ENSMUST00000171413 481 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm5139-201ENSMUST00000175943 249 ntBASIC6.73□□□□□ -1.33
Sox1P53783 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Sox1P53783 Gm22420-201ENSMUST00000178795 126 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm28017-201ENSMUST00000183434 126 ntBASIC6.73□□□□□ -1.33
Sox1P53783 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.73□□□□□ -1.33
Sox1P53783 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms