Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cx3cr1Q9Z0D9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cx3cr1Q9Z0D9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cx3cr1Q9Z0D9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm26833-201ENSMUST00000180899 440 ntBASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Gm40848-201ENSMUST00000221998 324 ntBASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cx3cr1Q9Z0D9 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.09■□□□□ 0.01
Cx3cr1Q9Z0D9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms