Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc1bQ920F6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.5■□□□□ 0.87
Smc1bQ920F6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.5■□□□□ 0.87
Smc1bQ920F6 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smc1bQ920F6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc1bQ920F6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smc1bQ920F6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Smc1bQ920F6 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.49■□□□□ 0.87
Smc1bQ920F6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smc1bQ920F6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc1bQ920F6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Smc1bQ920F6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.49■□□□□ 0.87
Smc1bQ920F6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smc1bQ920F6 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc1bQ920F6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smc1bQ920F6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.48■□□□□ 0.87
Smc1bQ920F6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smc1bQ920F6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc1bQ920F6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smc1bQ920F6 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc1bQ920F6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.47■□□□□ 0.87
Smc1bQ920F6 Gm13559-201ENSMUST00000120476 863 ntBASIC20.47■□□□□ 0.87
Smc1bQ920F6 Gm27741-201ENSMUST00000185060 237 ntBASIC20.47■□□□□ 0.87
Smc1bQ920F6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.47■□□□□ 0.87
Smc1bQ920F6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc1bQ920F6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Smc1bQ920F6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc1bQ920F6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc1bQ920F6 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc1bQ920F6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smc1bQ920F6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.46■□□□□ 0.87
Smc1bQ920F6 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.46■□□□□ 0.87
Smc1bQ920F6 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.46■□□□□ 0.87
Smc1bQ920F6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Smc1bQ920F6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smc1bQ920F6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.45■□□□□ 0.86
Smc1bQ920F6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smc1bQ920F6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smc1bQ920F6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms