Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cfap54Q8C6S9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.13■□□□□ 0.33
Cfap54Q8C6S9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Gm27357-201ENSMUST00000183754 135 ntBASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Gm24589-201ENSMUST00000116692 94 ntBASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cfap54Q8C6S9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cfap54Q8C6S9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Gm43514-201ENSMUST00000198852 424 ntBASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cfap54Q8C6S9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Fst-202ENSMUST00000223640 2612 ntBASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cfap54Q8C6S9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap54Q8C6S9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap54Q8C6S9 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap54Q8C6S9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap54Q8C6S9 Gm17808-201ENSMUST00000200859 894 ntBASIC17.08■□□□□ 0.33
Cfap54Q8C6S9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.08■□□□□ 0.33
Cfap54Q8C6S9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap54Q8C6S9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Cfap54Q8C6S9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cfap54Q8C6S9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms