Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Gm7284-201ENSMUST00000131667 944 ntBASIC17.55■□□□□ 0.4
Cacna1eQ61290 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Gm17971-201ENSMUST00000190239 806 ntBASIC17.55■□□□□ 0.4
Cacna1eQ61290 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Gm7791-201ENSMUST00000219066 539 ntBASIC17.55■□□□□ 0.4
Cacna1eQ61290 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cacna1eQ61290 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1eQ61290 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cacna1eQ61290 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cacna1eQ61290 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.53■□□□□ 0.4
Cacna1eQ61290 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Gm7370-201ENSMUST00000219471 767 ntBASIC17.53■□□□□ 0.4
Cacna1eQ61290 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cacna1eQ61290 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1eQ61290 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cacna1eQ61290 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1eQ61290 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1eQ61290 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1eQ61290 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1eQ61290 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.52■□□□□ 0.4
Cacna1eQ61290 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1eQ61290 Gm22697-201ENSMUST00000175194 63 ntBASIC17.52■□□□□ 0.4
Cacna1eQ61290 Mir1668-201ENSMUST00000184114 107 ntBASIC17.52■□□□□ 0.4
Cacna1eQ61290 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cacna1eQ61290 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cacna1eQ61290 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cacna1eQ61290 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.52■□□□□ 0.39
Cacna1eQ61290 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cacna1eQ61290 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1eQ61290 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cacna1eQ61290 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1eQ61290 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.5■□□□□ 0.39
Cacna1eQ61290 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1eQ61290 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1eQ61290 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1eQ61290 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1eQ61290 Gm37025-201ENSMUST00000195159 829 ntBASIC17.5■□□□□ 0.39
Cacna1eQ61290 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1eQ61290 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.5■□□□□ 0.39
Cacna1eQ61290 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1eQ61290 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cacna1eQ61290 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cacna1eQ61290 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms