Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Gm38308-201ENSMUST00000194934 1809 ntBASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav7d-3Q5R1I1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Gm22325-201ENSMUST00000158904 308 ntBASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav7d-3Q5R1I1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-3Q5R1I1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-3Q5R1I1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-3Q5R1I1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav7d-3Q5R1I1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav7d-3Q5R1I1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav7d-3Q5R1I1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav7d-3Q5R1I1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-3Q5R1I1 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav7d-3Q5R1I1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav7d-3Q5R1I1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Gm18671-201ENSMUST00000214826 683 ntBASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav7d-3Q5R1I1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav7d-3Q5R1I1 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Trav7d-3Q5R1I1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav7d-3Q5R1I1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Tgds-204ENSMUST00000228543 1594 ntBASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.07□□□□□ -0.32
Trav7d-3Q5R1I1 Gm6420-201ENSMUST00000193885 723 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms