Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
HLA-DRAP01903 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.04■■□□□ 1.12
HLA-DRAP01903 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
HLA-DRAP01903 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DRAP01903 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DRAP01903 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.03■■□□□ 1.12
HLA-DRAP01903 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DRAP01903 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DRAP01903 AC006970.2-201ENST00000450065 779 ntBASIC22.03■■□□□ 1.12
HLA-DRAP01903 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.03■■□□□ 1.12
HLA-DRAP01903 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DRAP01903 AC133552.2-202ENST00000575694 574 ntBASIC22.03■■□□□ 1.12
HLA-DRAP01903 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DRAP01903 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.03■■□□□ 1.12
HLA-DRAP01903 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.03■■□□□ 1.12
HLA-DRAP01903 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
HLA-DRAP01903 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DRAP01903 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DRAP01903 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
HLA-DRAP01903 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DRAP01903 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.02■■□□□ 1.12
HLA-DRAP01903 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DRAP01903 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DRAP01903 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.02■■□□□ 1.12
HLA-DRAP01903 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.02■■□□□ 1.12
HLA-DRAP01903 AC090192.1-201ENST00000517740 490 ntBASIC22.02■■□□□ 1.12
HLA-DRAP01903 AC100791.3-201ENST00000617619 330 ntBASIC22.02■■□□□ 1.12
HLA-DRAP01903 AC087633.2-202ENST00000565166 1439 ntBASIC22.02■■□□□ 1.12
HLA-DRAP01903 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.02■■□□□ 1.12
HLA-DRAP01903 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
HLA-DRAP01903 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DRAP01903 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC22.02■■□□□ 1.12
HLA-DRAP01903 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
HLA-DRAP01903 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.02■■□□□ 1.11
HLA-DRAP01903 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC22.01■■□□□ 1.11
HLA-DRAP01903 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
HLA-DRAP01903 AC010980.2-201ENST00000587099 1412 ntBASIC22.01■■□□□ 1.11
HLA-DRAP01903 MCRIP2P1-201ENST00000394346 511 ntBASIC22.01■■□□□ 1.11
HLA-DRAP01903 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DRAP01903 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.01■■□□□ 1.11
HLA-DRAP01903 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.01■■□□□ 1.11
HLA-DRAP01903 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.01■■□□□ 1.11
HLA-DRAP01903 AC105036.2-201ENST00000569468 176 ntBASIC22.01■■□□□ 1.11
HLA-DRAP01903 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.01■■□□□ 1.11
HLA-DRAP01903 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.01■■□□□ 1.11
HLA-DRAP01903 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DRAP01903 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC22.01■■□□□ 1.11
HLA-DRAP01903 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
HLA-DRAP01903 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DRAP01903 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DRAP01903 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DRAP01903 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DRAP01903 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22■■□□□ 1.11
HLA-DRAP01903 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22■■□□□ 1.11
HLA-DRAP01903 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22■■□□□ 1.11
HLA-DRAP01903 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
HLA-DRAP01903 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22■■□□□ 1.11
HLA-DRAP01903 AL512625.2-201ENST00000417533 625 ntBASIC22■■□□□ 1.11
HLA-DRAP01903 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22■■□□□ 1.11
HLA-DRAP01903 AL355472.2-201ENST00000422958 438 ntBASIC22■■□□□ 1.11
HLA-DRAP01903 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22■■□□□ 1.11
HLA-DRAP01903 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 AF201337.1-201ENST00000520239 748 ntBASIC22■■□□□ 1.11
HLA-DRAP01903 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22■■□□□ 1.11
HLA-DRAP01903 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
HLA-DRAP01903 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22■■□□□ 1.11
HLA-DRAP01903 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
HLA-DRAP01903 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DRAP01903 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC22■■□□□ 1.11
HLA-DRAP01903 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HLA-DRAP01903 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.99■■□□□ 1.11
HLA-DRAP01903 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.99■■□□□ 1.11
HLA-DRAP01903 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.99■■□□□ 1.11
HLA-DRAP01903 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
HLA-DRAP01903 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
HLA-DRAP01903 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.99■■□□□ 1.11
HLA-DRAP01903 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.99■■□□□ 1.11
HLA-DRAP01903 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 FEM1AP1-201ENST00000431297 1995 ntBASIC21.99■■□□□ 1.11
HLA-DRAP01903 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DRAP01903 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms