Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.99■□□□□ 0.63
ChkbO55229 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkbO55229 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.99■□□□□ 0.63
ChkbO55229 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkbO55229 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkbO55229 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkbO55229 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkbO55229 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
ChkbO55229 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.99■□□□□ 0.63
ChkbO55229 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ChkbO55229 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ChkbO55229 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ChkbO55229 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
ChkbO55229 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.98■□□□□ 0.63
ChkbO55229 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.98■□□□□ 0.63
ChkbO55229 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ChkbO55229 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
ChkbO55229 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
ChkbO55229 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.98■□□□□ 0.63
ChkbO55229 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ChkbO55229 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ChkbO55229 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.97■□□□□ 0.63
ChkbO55229 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.97■□□□□ 0.63
ChkbO55229 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.97■□□□□ 0.63
ChkbO55229 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ChkbO55229 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
ChkbO55229 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ChkbO55229 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkbO55229 Gm10849-201ENSMUST00000100397 618 ntBASIC18.96■□□□□ 0.63
ChkbO55229 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.96■□□□□ 0.63
ChkbO55229 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.96■□□□□ 0.63
ChkbO55229 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ChkbO55229 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkbO55229 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.96■□□□□ 0.63
ChkbO55229 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkbO55229 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkbO55229 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
ChkbO55229 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ChkbO55229 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
ChkbO55229 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.96■□□□□ 0.62
ChkbO55229 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.95■□□□□ 0.62
ChkbO55229 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
ChkbO55229 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.95■□□□□ 0.62
ChkbO55229 Gm7514-201ENSMUST00000209475 934 ntBASIC18.95■□□□□ 0.62
ChkbO55229 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.95■□□□□ 0.62
ChkbO55229 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ChkbO55229 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ChkbO55229 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ChkbO55229 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.94■□□□□ 0.62
ChkbO55229 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.94■□□□□ 0.62
ChkbO55229 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ChkbO55229 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
ChkbO55229 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ChkbO55229 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ChkbO55229 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ChkbO55229 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ChkbO55229 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ChkbO55229 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ChkbO55229 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.93■□□□□ 0.62
ChkbO55229 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ChkbO55229 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms