Protein–RNA interactions for Protein: A0A0A6YWL2

Ighv3-3, Immunoglobulin heavy variable V3-3 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-3A0A0A6YWL2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm27405-201ENSMUST00000184201 112 ntBASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 AV356131-201ENSMUST00000206201 750 ntBASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm26571-201ENSMUST00000181399 666 ntBASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm10033-202ENSMUST00000211874 928 ntBASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv3-3A0A0A6YWL2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms