Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12□□□□□ -0.49
Trav13-2A0A075B649 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Gm8493-201ENSMUST00000196881 489 ntBASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Gm38308-201ENSMUST00000194934 1809 ntBASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-2A0A075B649 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13-2A0A075B649 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Gm9194-201ENSMUST00000220749 1447 ntBASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Gm27032-201ENSMUST00000183124 1116 ntBASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Gm38205-201ENSMUST00000192243 258 ntBASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Gm40848-201ENSMUST00000221998 324 ntBASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-2A0A075B649 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms