Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 FAM99A-202ENST00000538190 1989 ntBASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 SOX15-203ENST00000570788 1093 ntBASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 AC233263.1-201ENST00000578059 224 ntBASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 RN7SL471P-201ENST00000580476 299 ntBASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNX11Q9Y5W9 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 AC007375.3-201ENST00000600936 2314 ntBASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SNX11Q9Y5W9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 MIR718-201ENST00000390190 70 ntBASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 CYP21A1P-202ENST00000354927 1481 ntBASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNX11Q9Y5W9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SNX11Q9Y5W9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.33■□□□□ 0.85
SNX11Q9Y5W9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SNX11Q9Y5W9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX11Q9Y5W9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNX11Q9Y5W9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.33■□□□□ 0.85
SNX11Q9Y5W9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.33■□□□□ 0.85
SNX11Q9Y5W9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.33■□□□□ 0.85
SNX11Q9Y5W9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.33■□□□□ 0.85
SNX11Q9Y5W9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.33■□□□□ 0.84
SNX11Q9Y5W9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.33■□□□□ 0.84
SNX11Q9Y5W9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.33■□□□□ 0.84
SNX11Q9Y5W9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX11Q9Y5W9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.33■□□□□ 0.84
SNX11Q9Y5W9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
SNX11Q9Y5W9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX11Q9Y5W9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms