Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
KCMF1Q9P0J7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 RARRES2P4-201ENST00000514074 484 ntBASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 AC005181.1-201ENST00000604782 1256 ntBASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KCMF1Q9P0J7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 CYP2T1P-201ENST00000432607 1285 ntBASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 CROCCP5-201ENST00000436658 830 ntBASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KCMF1Q9P0J7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 AL050303.2-201ENST00000619798 666 ntBASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KCMF1Q9P0J7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCMF1Q9P0J7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.39■□□□□ 0.7
KCMF1Q9P0J7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
KCMF1Q9P0J7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.39■□□□□ 0.7
KCMF1Q9P0J7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.39■□□□□ 0.7
KCMF1Q9P0J7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
KCMF1Q9P0J7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 AC006970.2-201ENST00000450065 779 ntBASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
KCMF1Q9P0J7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 ID1-201ENST00000376105 1233 ntBASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms