Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rbfox1Q9JJ43 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Gm6420-201ENSMUST00000193885 723 ntBASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rbfox1Q9JJ43 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rbfox1Q9JJ43 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rbfox1Q9JJ43 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.21■□□□□ 0.02
Rbfox1Q9JJ43 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rbfox1Q9JJ43 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rbfox1Q9JJ43 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rbfox1Q9JJ43 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rbfox1Q9JJ43 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rbfox1Q9JJ43 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms