Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Copb1Q9JIF7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Copb1Q9JIF7 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.57■□□□□ 0.72
Copb1Q9JIF7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Copb1Q9JIF7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Copb1Q9JIF7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Copb1Q9JIF7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Copb1Q9JIF7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Gm18671-201ENSMUST00000214826 683 ntBASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Copb1Q9JIF7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Copb1Q9JIF7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Gm42642-201ENSMUST00000200683 355 ntBASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Copb1Q9JIF7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Copb1Q9JIF7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Copb1Q9JIF7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Copb1Q9JIF7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Copb1Q9JIF7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Copb1Q9JIF7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Copb1Q9JIF7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Copb1Q9JIF7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 AV356131-201ENSMUST00000206201 750 ntBASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.51■□□□□ 0.71
Copb1Q9JIF7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms