Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.23■□□□□ 0.83
Chd1lQ9CXF7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1lQ9CXF7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1lQ9CXF7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1lQ9CXF7 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.22■□□□□ 0.83
Chd1lQ9CXF7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Chd1lQ9CXF7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Chd1lQ9CXF7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1lQ9CXF7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1lQ9CXF7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd1lQ9CXF7 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Chd1lQ9CXF7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Mir7075-201ENSMUST00000184187 82 ntBASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd1lQ9CXF7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Gm9847-201ENSMUST00000052528 599 ntBASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Chd1lQ9CXF7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Idnk-204ENSMUST00000226010 1898 ntBASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Chd1lQ9CXF7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Chd1lQ9CXF7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Chd1lQ9CXF7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd1lQ9CXF7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.16■□□□□ 0.82
Chd1lQ9CXF7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Chd1lQ9CXF7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms